Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1931 |
Symbol | |
ID | 6877916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1920797 |
End bp | 1921933 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642789801 |
Product | phosphonate metabolism protein PhnM |
Protein accession | YP_002220359 |
Protein GI | 198284038 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.042135 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGG GTTTCAGCAA TGCGCGAATC GTGTTGGAGG ATGTTGTATT GCATGGTGCG GTGCTCCTGG GTGCGGGAGG CAATATTGCG GATATCCTTG GGGAAACATC CCCCATCCCG GGCACCGAGG ACTGCACCGG CGATTTTCTT CTGCCAGGCT TTGTGGACGT GCACACGGAT AATCTGGAGC GCCAGGTGCA GCCGCGCAGC CATGTCCGCT GGCCTTCCCC TTCGGCATTT CTGGCCCACG ATGCCCAGTG CGCGGCGATG GGCATCACCA CCGTCGCCAA TGCCTTATGC GTGGGTGATG CCGGCTTTGA AAACGGGCGC ATCCAAACTC TGAAAAATGC GGTGGTAGAC TTGTCGGCCC TGGATGCAAG CGGGTCGCTA CGTGCCGATC ATGTGCTCCA TCTGCGTTGC GAACTCTCGG CGCCGAATAT GCAGGAACTT TTTGAGGCGG TCATGGACCA TACCAAGCTC CAAATGGTGA GCCTGATGGA TCACACCCCG GGCGTCGGGC AGTACGCCGA TCTGGAGAAG TTTCGAAAAA GTCGGCGCGA TGAGGGATGC TCGTCCGAGG AACTGGAGGG CATGATCGTC GAAGCTCAGG CGAGACGTCA TGCCCACAGC GAGAAAAACC GCGGCTATCT GCTGGATCAA CTCAAATATT CCTCTCTGGT TCTGGCGAGC CACGATGACC GCACCGAGGC GGAGGTCCTT CGCAACGCCC AGGATGGCAT CAAAGTCGCC GAGTTCCCGG TGTCCATGGA GGCGGCACGA GCGGCGCGTC AACAGAGTAT GGCTATTGTG GCAGGGGCCC CCAACGTGGT ACGCGGTGGA TCCCATTCCG GTAACGTGGC CGTCAGCGAT CTGGTCAAAG CTCGGTGTGT GGATGTCCTG GCCTCGGACT ATGTGCCCAA TGCGCTGTGT GAAGCGCCTT TCCGACTGGT GGATGATGGT CTTCTCGCGC TGCCCGAAGC GGTACGGATG ATCACTGCAG CTCCGGCGCG CATGTTAGGT CTGCCGGATC GTGGCACCAT TCGCGTAGGT CTGCGCGGTG ATCTGGTCCG CATCCGGCTC ATGGATGGGC ATCCGATCGT CCGCTCGGTC TGGAAGGCTG GTCAGCGGAT CGCGTGA
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Protein sequence | MTQGFSNARI VLEDVVLHGA VLLGAGGNIA DILGETSPIP GTEDCTGDFL LPGFVDVHTD NLERQVQPRS HVRWPSPSAF LAHDAQCAAM GITTVANALC VGDAGFENGR IQTLKNAVVD LSALDASGSL RADHVLHLRC ELSAPNMQEL FEAVMDHTKL QMVSLMDHTP GVGQYADLEK FRKSRRDEGC SSEELEGMIV EAQARRHAHS EKNRGYLLDQ LKYSSLVLAS HDDRTEAEVL RNAQDGIKVA EFPVSMEAAR AARQQSMAIV AGAPNVVRGG SHSGNVAVSD LVKARCVDVL ASDYVPNALC EAPFRLVDDG LLALPEAVRM ITAAPARMLG LPDRGTIRVG LRGDLVRIRL MDGHPIVRSV WKAGQRIA
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