Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1924 |
Symbol | |
ID | 6877909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1914892 |
End bp | 1916289 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642789794 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002220352 |
Protein GI | 198284031 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACACAA TCCATGCGCT ACTCGATGAT CTGAAGATCA ACAAACAACA CCGCCGAATC GTTCTGGCCG CTGGTTTGGG CATTTTTCTT GATGGTTATG ATTTGTCCAT CATCGCTGTC GCCCTGCTTT TGCTGAAACC TGACTGGCAT CTGTCGGCGG TGGCTACCGG CTTGCTGGGC GCGGCAACGC TGGCAGGCGC GGCACTTGGT GGTCTGGTGG GTGGGCGCAT TGCGGATCTT TTGGGCCGCA AAGTGCTTTA CCTGATTGAC GTGGCAGCAT TTTTTATGGC GGCCCTGCTC TCCGGTGTTG CTTGGGATGT GTCCTCCCTG ATCATTTTCC GCTTCTTTCT GGGTGTCGGT GTAGGTATGG ATTATCCCTT GAGTTCGAGC TACATCGCAG AATTCATGCC CAAAGCGCAG AGAGGAGCAG GACTCTCTTG GGCATTTACC TTGTGGATGA TTGGTGCTGT GGTTTCCGCA GTCGTTGGGT TGGTGCTGCT ACAGGCCGGT CCGAATGCCT GGCGCTGGAT GTTTATTAGC GGCGCGTTTC CCGCTCTGGC AGTACTCTGG TTGCGGCGCA ACCTTCCTGA GACTCCGCGC TGGTATATCG CGCATAACCG ACCGGAAGAG GCGATTCAGG TGCTTCAGAG CATGTCGCCG GAAGTGGATG CGCAAAGCCT TCGTGAAGCC CTTCAAAGGC AGGCTCCAGA ACTCGTCCAG ATACGCGCCT GGGCCACTTT GTTTGCTCCG CAATGGTTAC GGCGCACACT GTTGGTAGTC ATACCTTGGA TGATGGTGGA TATCAGTGTT TATGGTTTGA TCGTGTATCT GCCTATCTTG CTGGAGGGCT TCGGCATCCA CTCTCACACG GATGCCTTGG TGTGGAATGT GCTCTTCGAT CTCATCGCTT TGTGCGGTAT CGCGTCCCTG GCACTGAGCA CACGTCGGAT TGGTAGAGTT TTTCCGCAAA TCGCGGGTTT TGCGCTGAAT GCGTTTTTTC TGGGTGTCCT GGGTCTGGTA GCACTCTACA TGCATCCCCC GATCTGGCTG CTCATTGTCA CTATCTTCGG GTACACGTTC TTCAACAATT TTGGGCCAGC CACCACGACT TGGCTCCTGC CGGTAGAGAT TTTCCCAACG GATCTACGCG CCTCAGCCCA TGGCCTGGCG ACGGCCTGTT CCCGCGTGGC GGCGACGACC TCCGTTTTTC TGCTGCCCAG CGTGCATGCA GCGGTAGGTA ATGGTTGGCT GATGCTGATT CTGGCTGTTA CGGCGCTGGT GGGTTTACTG GTGACCTTGC TGCTGGGGCG CGATATGGAG CCCGGTATTC GTAGTCTAGA GGAAGTTTCA GAAGTGGCGG AGCCGAATAT CCGTGTAGCT GTGGCCATAG CGGATTAG
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Protein sequence | MHTIHALLDD LKINKQHRRI VLAAGLGIFL DGYDLSIIAV ALLLLKPDWH LSAVATGLLG AATLAGAALG GLVGGRIADL LGRKVLYLID VAAFFMAALL SGVAWDVSSL IIFRFFLGVG VGMDYPLSSS YIAEFMPKAQ RGAGLSWAFT LWMIGAVVSA VVGLVLLQAG PNAWRWMFIS GAFPALAVLW LRRNLPETPR WYIAHNRPEE AIQVLQSMSP EVDAQSLREA LQRQAPELVQ IRAWATLFAP QWLRRTLLVV IPWMMVDISV YGLIVYLPIL LEGFGIHSHT DALVWNVLFD LIALCGIASL ALSTRRIGRV FPQIAGFALN AFFLGVLGLV ALYMHPPIWL LIVTIFGYTF FNNFGPATTT WLLPVEIFPT DLRASAHGLA TACSRVAATT SVFLLPSVHA AVGNGWLMLI LAVTALVGLL VTLLLGRDME PGIRSLEEVS EVAEPNIRVA VAIAD
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