Gene Lferr_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1905 
Symbol 
ID6877890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1896077 
End bp1896994 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content61% 
IMG OID642789775 
Productprotein of unknown function DUF81 
Protein accessionYP_002220333 
Protein GI198284012 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGCTTT TCCTCCCGGT CGCCCACATG GCGGTAAATA TCTGGCTGAT CATCGGCTTT 
GGTCTGATCG TCGGGTTTCT CTCGGGTTTG ACGGGGGTCG GTGGCGGTTT TCTGATCACC
CCGCTGTTGA TTTTTGTCGG TGTGCCACCC CTCGTGGCGG TAGGCACCGG CGCGGCGCAA
ATCGTTGGGG CGTCGGCTGT CGGCAGTTAT GCGCACTGGC GTATGGGCAA CGTAGACATG
CGCATGGCCT TCATCCTCCT CGCCGGGAGC TGGATGGGCG GACTGCTGGG TGTGCATGTG
GCCCGTATCC TGGATGCGTC CGGGTATTTT GGACTGGTGG TCACCTTCCT CTACGTCGGC
CTGCTGGGAT TTATCGGCAT CTCCATGCTC GTGGAGTCGA CCCTCGCCAT GCGTTGGGGC
CATCATCCCG GTAAAAACAA AAAGAAAGCG CGGGCAGGGA TTCCCTGGCT GGATCGATTG
CCCTGGCGGA TGGAATTCCC CGTTTCCGGA CTGCGCCTTT CCATTCTGGC ACCGGTACTG
CTGGGTTTCG TGGTGGGAAT CATGGCGGCG CTGATGGGGG TGGGCGGCGG TTTCGTCATG
GTCCCGATCA TGCTGTATCT GCTCAAGATG CCGACCAGGG TGGTGGTAGG GACTTCGCTA
TTTCAGTTGC TGTTTACCAG CGCGGAAGTG GGCATTTTGC AGGCCGGCAT GAACCACGCC
GTTGATCCTT ACCTGGTCCT GGCGCTGGTG CTGGGCTCCA TATTCGGGAC GCAGTTCGGC
GCCCGGCTGG GGGCGCTGAT GCGTGGGGAG CAGTTGCGTC TGGTGCTGGC GCTGGTGGTT
ATGGGCGTCG CCATCAAGAT GGGGCTGGGG CTGGTGATTC CGCCCGAGCA CCTCTACAGC
ATGGCACGAG TGGTTTAG
 
Protein sequence
MELFLPVAHM AVNIWLIIGF GLIVGFLSGL TGVGGGFLIT PLLIFVGVPP LVAVGTGAAQ 
IVGASAVGSY AHWRMGNVDM RMAFILLAGS WMGGLLGVHV ARILDASGYF GLVVTFLYVG
LLGFIGISML VESTLAMRWG HHPGKNKKKA RAGIPWLDRL PWRMEFPVSG LRLSILAPVL
LGFVVGIMAA LMGVGGGFVM VPIMLYLLKM PTRVVVGTSL FQLLFTSAEV GILQAGMNHA
VDPYLVLALV LGSIFGTQFG ARLGALMRGE QLRLVLALVV MGVAIKMGLG LVIPPEHLYS
MARVV