Gene Lferr_1896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1896 
Symbol 
ID6877881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1881700 
End bp1882305 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID642789766 
Producthypothetical protein 
Protein accessionYP_002220324 
Protein GI198284003 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.649573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG ATAGCGGCAT CCAGAATATC ATGAACTCAT TTCTGATGTT CTGTGTGTTG 
TGTTTGATGA GCATGAGCGT TGCCATGGCC GGTGATGCGC CGCATGGTGG GAGCAAAGCA
CATATATTAT GGACGCAAAT ATTGCGGCAT CGTGTTACCT ATATTCAGGA CGGAACGCAT
GGTCCGGTTA TATATGATGT TCAGGATCCG AATTGTCCAT ATTGTCACGT ACTATATGAA
AATGAGATCC CCCTGATTGA ATCCGGGAAA CTAACCGTGC GGTATATACC AGTAGCGATC
TTGACTCCCG GAAGTCAGGG GGAAGCGGCG GCATGGTTGC AGGCCTCACA TCCACTGTTT
GCGTTGCAGC ATTTTGAAAA TATCGTTGGT GATGCCTTTC GTAGCGAAAA TACTAGCACC
CTGCCGACAG TAACAGCCAG CGCGTCGACG AGAATCAGGC TTCATGATAA TCTTCTTATT
ATCAGGTCAT TGGGCGTAAC AGGAACACCC GCCATTATAT ACCGGACTGA AGGCGGCAGG
ATTAAAATAG CTATGGGATT GATATCCAGG CGCAGGTTGG TTGCCATGTT GCCCTATTTC
AAATAG
 
Protein sequence
MTNDSGIQNI MNSFLMFCVL CLMSMSVAMA GDAPHGGSKA HILWTQILRH RVTYIQDGTH 
GPVIYDVQDP NCPYCHVLYE NEIPLIESGK LTVRYIPVAI LTPGSQGEAA AWLQASHPLF
ALQHFENIVG DAFRSENTST LPTVTASAST RIRLHDNLLI IRSLGVTGTP AIIYRTEGGR
IKIAMGLISR RRLVAMLPYF K