Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1875 |
Symbol | |
ID | 6877860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1856385 |
End bp | 1857773 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642789745 |
Product | cysteinyl-tRNA synthetase |
Protein accession | YP_002220303 |
Protein GI | 198283982 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000229747 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATC TGCCCGTAGT GACCCTCTTT GACACCCTGC GCCGCAGTAA AACGCCGCTA GAGGTGCTGC GCCCCAATCA TGTGGGACTC TATGTCTGCG GGATGACCGT ATACGACTTC TGTCATCTCG GCCATGCCCG GGTCATGGTC ACCTTCGATA CGGTGGTGCG CTATCTGCGT GAGCGCGGAT ATGAGGTGAC CTACGTTCGC AATATCACCG ATATCGACGA CAAGATCATT CGTCGGGCGT TGGAGTGTGG CGAGTCGATT CAGTCACTCA CGGCACGTTT CATCGATGCC ATGCATGAAG ATGAGGCGGC GTTGCTCTGC CGGAGACCTG ATCTGGAACC GCGGGCGACG GAGCATGTGG GCGCCATGCA AACCCTGATC GGCGAACTCA TCCACAGAGG GCATGCCTAT GTGGCGGCCA ATGGCGATGT GTACTACGCG GTGCGCAGTT TTCCGGAGTA TGGCCGCCTT TCCGGCAAGT CCATCGACGA GTTGACGTCG GGTGCGCGGG TCGAAGTCGG CGAAGAAAAA CGCGATCCTC TGGATTTTGC CCTGTGGAAA GCGGCCAAGC CCGGCGAGCC GTCCTGGCCT TCAGCGTGGG GAGAGGGGCG GCCGGGCTGG CATATCGAGT GCTCCGCCAT GTCCGCCGAC GCCCTGGGCT GTGCCTTTGA CATACATGGC GGTGGTGCCG ATCTGCAGTT CCCGCATCAT GAGAATGAAA TCGCCCAGTC CCAGGGCGCG GGCTGTGCTT TTGCCCATTA CTGGATGCAC AACGGCTTTG TTCGCATCAA CGACGAGAAA ATGTCAAAAT CCCTGAATAA TTTCTTCACG GTGCGGGAGC TTCTGCCCCG CTATTCCGGC GAAGTGCTGC GTTTTTTCAT TCTCTCCAGC CATTACCGCA GCCCATTGAA TTATGCGGAA GACGCGCTGG AGCAGGCGAG AGCGGGCCTC ACGCGGCTCT ATACCGCCCT GCGTGGAATG CCCAGACCTA AAATCGTGGC GGAGATGGGG AGCGAGTGGC GGGAGCGTTT CCATGCCGCC ATGAGTGATG ATTTTCATAC GCCGGCAGCC CTTGCCGTGC TTTTTGATCT GGCCCGCGAA CTGAATCGCC TGCGGGACGA AGGCAGTGAG GTGGCAGCGC CGCTCGCCAC CCTGTTACGG GAACTGGCGG GTGTGCTGGG CTTGCTGCAA CAGGACGCCG AGGGTTTTCT TCGCGGCCAC GACGCGGACG TATCCTGGAT CGATGGCCGT ATTGCCGCGC GCGCCGCGGC GCGACAGGCC CGTGATTTTG CCGGAGCCGA CGCCATCCGG CAGGAATTGA CAGCCGCTGG AGTCATCCTC GAAGATGGCC CCGGCGGTAC CACATGGCGG CGGGGCTAA
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Protein sequence | MINLPVVTLF DTLRRSKTPL EVLRPNHVGL YVCGMTVYDF CHLGHARVMV TFDTVVRYLR ERGYEVTYVR NITDIDDKII RRALECGESI QSLTARFIDA MHEDEAALLC RRPDLEPRAT EHVGAMQTLI GELIHRGHAY VAANGDVYYA VRSFPEYGRL SGKSIDELTS GARVEVGEEK RDPLDFALWK AAKPGEPSWP SAWGEGRPGW HIECSAMSAD ALGCAFDIHG GGADLQFPHH ENEIAQSQGA GCAFAHYWMH NGFVRINDEK MSKSLNNFFT VRELLPRYSG EVLRFFILSS HYRSPLNYAE DALEQARAGL TRLYTALRGM PRPKIVAEMG SEWRERFHAA MSDDFHTPAA LAVLFDLARE LNRLRDEGSE VAAPLATLLR ELAGVLGLLQ QDAEGFLRGH DADVSWIDGR IAARAAARQA RDFAGADAIR QELTAAGVIL EDGPGGTTWR RG
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