| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1860 |
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| Symbol | |
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| ID | 6877844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1839340 |
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| End bp | 1842156 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789729 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_002220288 |
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| Protein GI | 198283967 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA CTCTGGATCG CCCCTTTGCC CCCGCCGAGA TCGAAACCCA ATGCTACGCA
CGCTGGGAAA CCCACGGCCT GTTCCAGCCG AAAGGCAGTG GAACCCCCTA TTGCATCATG
CTTCCGCCAC CCAATGTCAC CGGCACCCTG CATATGGGTC ACGCCTTTCA GGATACCCTC
ATGGATATCC TCACCCGCGT CCACCGGATG CGCGGCGAGC GCACCCTCTG GCAGCCGGGG
ACCGATCATG CCGGTATCGC CACCCAGATG CTGGTGGAAC GGCAACTGGT ACAGGAAGGC
GGCGATCGCC ATCAGATGGG CCGCGGTGCC TTTCTGGAAC GGGTCTGGCA GTGGCGTCGG
GAATCCGGTG GCCATATCAC CCGGCAGATG CGACGGCTGG GAGCATCCTG TGACTGGTCA
CGCGAGCGTT TTACGCTGGA CAGCGGGCTC TCCCATGCGG TCACCGAAGT CTTCGTCCGC
CTCCATGACG AAGGGTTGAT CTACCGCGGC AAACGGCTGG TCAACTGGGA TCCGGTCCTG
CGTACCGCAG TCTCCGATCT GGAGGTCATC AGCGAAGCGG AGCAAGGCTC GCTCTGGCAC
ATCCGTTATC CCCTCAGCGA TGGCACCGGC TTCCTCGTGG TCGCCACCAC CCGTCCGGAA
ACCCTGCTGG GCGACGTGGC GGTGGCGGTT CACCCCGACG ATCCGCGCTA CGCCGCCCTC
GTCGGCAAGA CCCTGCGCCT ACCGGTCATG AACCGTGAGA TTCCCATCAT CGCGGACGAT
TATGTCGATC CGGAATTCGG CTCCGGCTGC GTCAAAATCA CCCCGGCCCA CGATTTCAAC
GACTATCAGG TGGGGCAACG GCACAACCTG GCCCTGCTCA ACGTCTTTAC CCCCGACGCG
CATATCCGGG ACAGTATCGA GGTCTTCGGC GACGACGTCG TCGCCGGGGA GATTCCCGAG
GCCCTACGCG GACTGGACCG TTATGCCGCC CGCCAGCAGA TTCTCATCCT GCTGGCGGCG
GAAAACCTGC TGGAACGCAC CGACGAACAC CAACTCATGG TGCCCCGCGG CGACCGCTCC
CATGCCGTCA TCGAGCCCTA CCTAACGGAC CAATGGTATG TGCGGGTCGC CCCCCTGGCG
GAACCGGCCA TCCGCGCGGT GGAAGAAGGC CGCATCCGCT TCGTGCCGGA AAACTGGAGC
AAAACCTACT TCGACTGGAT GCAGCGTATC GAGGACTGGT GCATCTCTCG CCAGCTCTGG
TGGGGGCACC AGATTCCCGC CTGGTACGGC CCCGACGGCA AAATCTTTGT CGCTCGTCGT
GAAGAGGAAG CGCAGTCGGA AGCCGTCCGC CATTACGGCA TGCCGGTGGT CCTGGAACGC
GACCCGGACG TACTCGACAC CTGGTTCAGT TCGGCGTTGT GGCCCTTCAC CACTCTGGGC
TGGCCGGAAA AAACATCGGA CCTTGCCCAG TTCTACCCCA CCAGCGTGCT GGTCACCGGC
TTCGACATCA TTTTTTTCTG GGTGGCGCGA ATGATCATGA TGGGTCTGCG CTTCATGGAC
GATGTGCCAT TCCATGAAGT CTATGTCCAC GGTCTGGTGC GCGATGCCGA GGGCCAGAAG
ATGAGCAAGT CCAAGGGCAA TGTCCTCGAC CCCATCGACC TCATAGACGG CATCAGTCTG
GAAGACCTCG TCGCCAAGCG TACCCGGGGC CTCATGCAGC CGCAGATGGC GGCCAAAATC
GAAAAGGCCA CCCGTAAGGA GTTCGCTGAC GGCATTCCCG CCTTCGGCAC CGATGCCCTG
CGCTTCACCT TCGCGGCACT GGCCACCCAG GGCCGGGACA TCAAGTTTGA CCTCAAGCGG
GTGGAGGGGA ATCGCAATTT CTGCAACAAG CTTTGGAACG CCTCGCGTTT CGCCCTGATG
CAGACACCAA CTCCGGCCGC TCTGGAAGGC GAGCGCGAGC TGCTGGCGCC GGAACGCTGG
ATCATCGGTC GCCTGCAACA CTGCGAGGCG GCCGTCAACA GCGCCATCGA CCAGTATCGC
TTTGCCGACG CCGCCCATGC ACTCTTCCAG TTTTTCTGGA ATGACTACTG CGACTGGTAT
ATCGAACTGA GCAAACCGGT GCTGCGCGAG GGCGGCCCGT TCACCTCGGC ACAACAGTGC
GGCACCCGCA ATACCCTGCT GCGGGTGCTG GAGGCCGGCC TGCGTCTGAT GCACCCGGTG
ATGCCCTTCC TCACCGAGGA ACTCTGGCAG CGGGTCGCAC CGATGATCGG CAAGGCGGGG
GACAGCATTG CCCTCGCCCC CTACCCGGTG GCCGATCTCG CCCGTGTGGA CACCGATGCC
GATGCCGATA CGGAATGGCT GATTGCCGTC ATCCGCGCCA TCCGCTCGGT GCGCGGCGAG
ATGGATATCC CACCGGGGAA ACCTCTGCCC CTGCTCCTGC AAGCCGGCGA TACCCATGAC
CGGGAAAGGG TGGAACGCTA CCGGTCCTGG CTCTTCGCCC TCAGCCGCCT CGCCAGTCTG
GAATGGCTGG ACGCCGAAGA GGAAGCGCCG CCCGCCGCCT TGCAACTGGT CGGCGATCTG
CGCGTCCTCG TCCCTCTCGC GGGGGTGATC AACGTCGCTG CCGAACAGAT CCGCCTCGCC
AAGGAACAGC AACGCCTGGA ACAGGATCGC GCCAAAACCG TCGCCAAACT CGGGCAGGAA
AGCTTTCGCA GCCGGGCGCC CGCAGAGGTG GTCGCCAAAG AAGAGGAACG CCTGCGGGAG
GTGGATGCCG CATTACTGCA ACTGGGGGAG CAGGCACGGC GGTTAGCCTT GTTGTGA
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| Protein sequence | MTDTLDRPFA PAEIETQCYA RWETHGLFQP KGSGTPYCIM LPPPNVTGTL HMGHAFQDTL
MDILTRVHRM RGERTLWQPG TDHAGIATQM LVERQLVQEG GDRHQMGRGA FLERVWQWRR
ESGGHITRQM RRLGASCDWS RERFTLDSGL SHAVTEVFVR LHDEGLIYRG KRLVNWDPVL
RTAVSDLEVI SEAEQGSLWH IRYPLSDGTG FLVVATTRPE TLLGDVAVAV HPDDPRYAAL
VGKTLRLPVM NREIPIIADD YVDPEFGSGC VKITPAHDFN DYQVGQRHNL ALLNVFTPDA
HIRDSIEVFG DDVVAGEIPE ALRGLDRYAA RQQILILLAA ENLLERTDEH QLMVPRGDRS
HAVIEPYLTD QWYVRVAPLA EPAIRAVEEG RIRFVPENWS KTYFDWMQRI EDWCISRQLW
WGHQIPAWYG PDGKIFVARR EEEAQSEAVR HYGMPVVLER DPDVLDTWFS SALWPFTTLG
WPEKTSDLAQ FYPTSVLVTG FDIIFFWVAR MIMMGLRFMD DVPFHEVYVH GLVRDAEGQK
MSKSKGNVLD PIDLIDGISL EDLVAKRTRG LMQPQMAAKI EKATRKEFAD GIPAFGTDAL
RFTFAALATQ GRDIKFDLKR VEGNRNFCNK LWNASRFALM QTPTPAALEG ERELLAPERW
IIGRLQHCEA AVNSAIDQYR FADAAHALFQ FFWNDYCDWY IELSKPVLRE GGPFTSAQQC
GTRNTLLRVL EAGLRLMHPV MPFLTEELWQ RVAPMIGKAG DSIALAPYPV ADLARVDTDA
DADTEWLIAV IRAIRSVRGE MDIPPGKPLP LLLQAGDTHD RERVERYRSW LFALSRLASL
EWLDAEEEAP PAALQLVGDL RVLVPLAGVI NVAAEQIRLA KEQQRLEQDR AKTVAKLGQE
SFRSRAPAEV VAKEEERLRE VDAALLQLGE QARRLALL
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