Gene Lferr_1858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1858 
Symbol 
ID6877842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1838209 
End bp1838634 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID642789727 
ProductDNA polymerase III chi subunit HolC 
Protein accessionYP_002220286 
Protein GI198283965 
COG category[L] Replication, recombination and repair 
COG ID[COG2927] DNA polymerase III, chi subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGTCG CCTCGTTTTA TACCCTGCCC CCGACACTGC TTACCGCGCA CGAACAGCGG 
CGCGGCATGT GCCGGGTGAT TGCCAAGGTG TGGCAGGTCA TGGGAGAAGC AGATATCCTG
TGTCCGGATA CGGAGGCCGG ACAGACCCTG GATGACCTGC TCTGGACCTT TCAGGCGGGA
GCTTTCGTGC CCCATGCCCG GGGTGCAGGA GAACCGGTAC GCATCCACGA GAACGGTGCA
TGGCCCTTGC AGGGCAAGGC GCTGGTGCTC TGCGGGCTGG ACAAATTGCC AGCGCCCCTC
CCCCCCTGCG AGCGGCTCAT CGACTTCATT CCGGTCGCAG AGCAACTGCG CGGCTTCGCC
AGAGAACGAT ACAGACAATT AAAGAACGCA GGATTCACCA TGCAGGTGCA TCCCCTGGAA
GCCTGA
 
Protein sequence
MPVASFYTLP PTLLTAHEQR RGMCRVIAKV WQVMGEADIL CPDTEAGQTL DDLLWTFQAG 
AFVPHARGAG EPVRIHENGA WPLQGKALVL CGLDKLPAPL PPCERLIDFI PVAEQLRGFA
RERYRQLKNA GFTMQVHPLE A