Gene Lferr_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1836 
Symbol 
ID6877820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1818599 
End bp1819222 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content57% 
IMG OID642789705 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002220264 
Protein GI198283943 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.850455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT ATGCCATGCT CATCAATCTG GATACCTGCG TCGGCTGCAA TGCCTGTATG 
GCCGCTTGCG CCATGGAAAA CCAGACGCCC GTGTGGAATC CGGAAAAATA CCGCACCTAT
GTGTACGACG AAGAAATTGA AATCGGGGAT AAGTTCCTCC GCCAGTTTTT TCCCAAGCTC
TGTAACCATT GCGACAACCC GCCCTGTGTG AGCGTCTGCC CGACTGGCGC CACCTGGAAG
GAGGCCAACG GCATCGTCCG CGTCAACCCC GACATCTGCA TGGGTTGCCA AGCCTGTGCC
ATGGCCTGCC CCTACGATGC TCGCTACCCT GCCGACAGCA ACGATATCGA CAAGGGACTG
GGCTATTACG GCAAGGACTT TCTCAAACGT ACCGTGCCCA GCATCGATAA ATGCGACTTC
TGCTACGACC GCCTGCAGCA AGGCCTGGAG CCCGCCTGCG TGGAAACCTG CGTAGCCCAC
GCCCGCATTT TCGGTGACCT GGACAACCCC AACGATCTCA TCACCAAGGT GGTCGCGACC
GGCAAGGCTC AGGGTCTGCT CACCGAACTG GGCACCGGCC CCAATATTTA CTACATCCAC
AAGCTTCCGG AGGATCTCGT ATGA
 
Protein sequence
MTKYAMLINL DTCVGCNACM AACAMENQTP VWNPEKYRTY VYDEEIEIGD KFLRQFFPKL 
CNHCDNPPCV SVCPTGATWK EANGIVRVNP DICMGCQACA MACPYDARYP ADSNDIDKGL
GYYGKDFLKR TVPSIDKCDF CYDRLQQGLE PACVETCVAH ARIFGDLDNP NDLITKVVAT
GKAQGLLTEL GTGPNIYYIH KLPEDLV