| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1828 |
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| Symbol | |
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| ID | 6877812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1809212 |
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| End bp | 1810048 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789697 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002220256 |
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| Protein GI | 198283935 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTG GGAAGTCGGG GTTGTTTCTC CAGGCCGGTA GGGCGCAGCG GACAGAAAAG
CCGGACATGC GCGTTGTTTG GCAAACGGTG TCTTTACTCG TCCTATTTTT CGCCATACCG
GCTTGGGGAT CAGGGACAGG GCGCGTCGTG CCCATCCTGC TCTATCATCG TTTTGGTCCC
GTGCTGCGAG ATGCCATGAC CGTTCGCACG ATGGTCTTCG CGGCACAGAT GGAATACCTG
AGGAGCCATG GCTACCGGAT TGTCCCGCTC AAGGAAGTCG TGGCATATAT TCGTGGCGTT
GGACCCCCTC CCCCTCCCCA TTCCGTGGTG ATCACCGCGG ATGACGGGCA CCAGTCGGTG
TACACGGACA TGTTTCCCCT GGTGCAGCGT TACCATATTC CGGTGACGCT CTTCATCTAT
CCCTCCGCCA TATCCCGGGC GTCTTACGCC CTGACCTGGG ATGAGTTGCG GATCATGCAT
GACTCCGGGC TCGTGAATAT CCAGTCCCAC ACCTATTGGC ATCCGAACTT CAAGATAGAA
AAGAAACGTC TTTCCCCCCA GGCATACGAG AAGTTCGTGG CCATGCAGTT GGAAAAGTCC
AGGGCGAAGC TCGATCAGGA ACTGGGGATC AAGGTGGACA TGCTCGCCTG GCCCTACGGG
ATCTACAACG AGGAGCTCAT CAAGAGCGCT GCTACGGCGG GATATATCGC CGCCTTCACC
ATGGTAAGGG CGCCTGCCGG GCCATCGGAT AACGTGATGG CCCTCCCGCG CTATCTGGTC
ACGGACCAGG ATACGGGCAA GACATTGGGA AGACTGTTGA CCACGGACTC CGGATAA
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| Protein sequence | MELGKSGLFL QAGRAQRTEK PDMRVVWQTV SLLVLFFAIP AWGSGTGRVV PILLYHRFGP
VLRDAMTVRT MVFAAQMEYL RSHGYRIVPL KEVVAYIRGV GPPPPPHSVV ITADDGHQSV
YTDMFPLVQR YHIPVTLFIY PSAISRASYA LTWDELRIMH DSGLVNIQSH TYWHPNFKIE
KKRLSPQAYE KFVAMQLEKS RAKLDQELGI KVDMLAWPYG IYNEELIKSA ATAGYIAAFT
MVRAPAGPSD NVMALPRYLV TDQDTGKTLG RLLTTDSG
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