Gene Lferr_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1818 
Symbol 
ID6877802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1798181 
End bp1798522 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content41% 
IMG OID642789687 
Productalkylphosphonate utilization operon protein PhnA 
Protein accessionYP_002220246 
Protein GI198283925 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2824] Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism 
TIGRFAM ID[TIGR00686] alkylphosphonate utilization operon protein PhnA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.942108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAGTA TTCCGAGTTG TCCGAAATGC AGTTCAAATT ACGTCTATGA AGACGGCAAT 
ATTTATATAT GTCCAGAATG CGCACAGGAA TGGCCAAAAG AAAATAATCT GGAAAAAATT
GACTCCCTTC GTGTTTCTGA TGCAAATGGC AGTGCCATCA ATGATGGCGA TACCGTGGTC
GTGGTGAAAG ATCTCAAGAT AAAAGGGTCA TCATCAATAA TAAAAGTTGG AACAAAAATA
AAGAACGTCC GCATTGTTGA CGGTGATCAT AACATTGATT GCAAGGTGGA TGGCATTGGT
GCGATACAGT TGAAGTCCGA GTTTCTGCGA AAAGTGCCAT GA
 
Protein sequence
MGSIPSCPKC SSNYVYEDGN IYICPECAQE WPKENNLEKI DSLRVSDANG SAINDGDTVV 
VVKDLKIKGS SSIIKVGTKI KNVRIVDGDH NIDCKVDGIG AIQLKSEFLR KVP