Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1747 |
Symbol | |
ID | 6877729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1723938 |
End bp | 1725467 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642789616 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002220176 |
Protein GI | 198283855 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.128631 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGCAA GCGCAATTCA TGCGACTACC CCTCCTGAAT CATCCCAAGA GCATCGTTGG CTGATCACCA TCGCCTTCAT GCTGGCGATG GTGATGGTCT TGTTGGACAT GACCGTAGTG AGCGTGGCGC TGCCCTATAT GATGGGAACC TTGGCTGCTA CGCCGAACCG GATCACTTGG GTGCTCACCG CCTATCTGGC CGCCAACGCA GTCACTATAC CATTGACCAG CCATCTTGCC GCCCTCTTTG GGCGGCGGCG TCTTTTCCTC ATCAGTGTTT CCGGTTTTGT CGTTGCCTCG GGGCTGTGCG GGGCGAGCCA GACTTTGGCG GAAATCGTCT TTTTACGCAC CCTGCAAGGG GGATTCGGCG CGCTCATGGT GGTCTTGGCC CAATCCACCA TGGTCAACCT CTTTCCGGGC AAGGAACGGG GGCGAGCCAT GGCCATTTGG GGCATGGTGC TGATGGTGGC GCCGGCCATG GGTCCGGTCT TTGGCGGCTA TATCACGCAG CACATGGGCT GGCGTTGGCT GTTCTACATC AACCTTCCCG TCGGGATTTT TTCGCTCTTG CTGGGTGCCG CCACCATGCG GAAGAGCGAA AGAAAAAATC TGGCCACCGA CTGGCCGGGT CTGTTGCTCA TGGCGATTGG AATCGGCAGC CTGCAAATCG TGCTGTCACG GGGTAATGAG GATTATTGGT TTGACTCCAG ACTCATCGTG GCCCTGTCGA TCCTCGCGGT TTTTGGTATC CTCACCTTTT TGCTGCGGGG ATGGATGATC GCCGACAACA TCATCGATCT CCATCTCTTT CGCGACCGCA GTTTCGCTAC CGCCACGCTG ATCACCGGCG TATTCGGCCT TGGCCTCTTC GGCACCACCG CCATGCAGCC GCTCATGCTG GAGGGGCTGC TGAATTACAT GCCGGAAACC ATCGGCTGGG TCATGTTTCC GCGCGGCGTT GCCAGCGCCG TTACCATGAT GATCGTTGGG CGCTTCATCA ATCGTTACCA GCCGCGACTT TTTATCGTAG CCGGGGTTTT GCTGACCGGG ATCAGTACCT GGATCATGAC CAGTTACAGT CTGTATATCA GTCCTGTTTG GGTCATTTAT CCCGGTATTA TCCGGGGGAT CGGCATGGGG ATGATCTTCG TGCCCCTTAC CGTCATCGCC TTCGATACCC TGCCGCTTGC GGTATCGGCG GAAGCCAGCG GCATTTTCAA CCTCGCCCGC ACCCTCGGGA ATTCCATCGG CATCGCCATC GACGGTACCG TGCTCACGAA TGAGACCCAG ATCAACTGGA ACCAGTTGGG CGGACACATC AATACCTTCA GTGCGACGCT GCCGAATTGG CTGCAAGCCA GCGGATTGGC ACCACAGGAT CCTCGCGTCT GGGCATTGCT CGGTCAGACC TTATTCAGCC AGGCCGAAAT GATCGGCTTC CTGGACGTGT TTCAGTGGAT CACCATCATC TTCTTTTGCT TGTTACCCCT GATATTGCTC ATCCCCAAGC GTATTCTTCC AACAGGTTAA
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Protein sequence | MAASAIHATT PPESSQEHRW LITIAFMLAM VMVLLDMTVV SVALPYMMGT LAATPNRITW VLTAYLAANA VTIPLTSHLA ALFGRRRLFL ISVSGFVVAS GLCGASQTLA EIVFLRTLQG GFGALMVVLA QSTMVNLFPG KERGRAMAIW GMVLMVAPAM GPVFGGYITQ HMGWRWLFYI NLPVGIFSLL LGAATMRKSE RKNLATDWPG LLLMAIGIGS LQIVLSRGNE DYWFDSRLIV ALSILAVFGI LTFLLRGWMI ADNIIDLHLF RDRSFATATL ITGVFGLGLF GTTAMQPLML EGLLNYMPET IGWVMFPRGV ASAVTMMIVG RFINRYQPRL FIVAGVLLTG ISTWIMTSYS LYISPVWVIY PGIIRGIGMG MIFVPLTVIA FDTLPLAVSA EASGIFNLAR TLGNSIGIAI DGTVLTNETQ INWNQLGGHI NTFSATLPNW LQASGLAPQD PRVWALLGQT LFSQAEMIGF LDVFQWITII FFCLLPLILL IPKRILPTG
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