Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1732 |
Symbol | |
ID | 6877714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1705884 |
End bp | 1706960 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642789601 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_002220161 |
Protein GI | 198283840 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00156138 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00249428 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA TAGCCATATT TGCGGGTGAC GGCATTGGTC CGGAAATCGT GGCGGCTGCC CGGCAAGTGC TGGATGCCGT GGATCAGGCC GCGCGGCTCG GCCTGCACTG CAGCGAGGGC CTGGTGGGCG GCGCGGCGCT GGATGCCAGC GATGATCCCT TGCCGGCCGC CTCCTTGCAG TTGGCTCTGG AGGCGGATGC GGTCATTCTG GGGGCGGTGG GCGGCCCCCG CTGGGACGCA TATCCGCCCG CCAAACGCCC GGAACAGGGA TTGCTGCGCC TGCGCAAGGG GCTGGATCTC TATGCGAACC TGCGTCCCGC GCAGATTTTT CCGCAGTTGC TGGATGCTTC CCCGTTACGC CCGGAGCTGG TGCGCGATGT CGACATCCTG GTGGTGCGCG AGCTGACCGG GGATATCTAC TTCGGTCAGC CGCGTGGTCT GGAAGTGGTC GATGGCAAGC GTCGCGGCTT TAACACCATG GTCTATGACG AGGATGAAAT CCGCCGCATC GCCCATGTGG CCTTCCGCGC TGCCCAGGGG CGTCGCAAGC AGTTGTGCTC GGTGGACAAG GCCAATGTCC TGGAGACCAC ACGTTTGTGG CGCGAGGTGG TCACCGAGGT GGCGCAGGAC TATCCCGATG TGCAGCTCAG TCACATGTAT GTGGATAATG CCGCCATGCA ACTAATCCGT GCCCCGGCAC AGTTCGATGT GCTGCTGACC GGCAACATGT TCGGTGACAT TCTTTCTGAC GAGGCTAGTC AGTTGACCGG CTCCATCGGC ATGCTGCCCT CGGCCTCACT GGGCGAGGGC CGGGCGATGT ATGAGCCCAT CCACGGCTCG GCGCCGGACA TAGCCGGGCA GGACAAGGCG AATCCCTTAG CCACGATTCT GTCCGTGGCG ATGATGCTGC GGTATTCTCT CGGTGCCGAG CTCTGGGCGC AGCGGGTGGA GGCGGCGGTG CAGCGAGTAC TGGATCAAGG CCTGCGTACT GCAGATATCG CGGCGCCGGG AGCGCCGGTG ATCGGCACCA AAGCCATGGG TGCCGCGGTG GTCGACGCCC TGAACTTCAA GGATTGA
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Protein sequence | MKKIAIFAGD GIGPEIVAAA RQVLDAVDQA ARLGLHCSEG LVGGAALDAS DDPLPAASLQ LALEADAVIL GAVGGPRWDA YPPAKRPEQG LLRLRKGLDL YANLRPAQIF PQLLDASPLR PELVRDVDIL VVRELTGDIY FGQPRGLEVV DGKRRGFNTM VYDEDEIRRI AHVAFRAAQG RRKQLCSVDK ANVLETTRLW REVVTEVAQD YPDVQLSHMY VDNAAMQLIR APAQFDVLLT GNMFGDILSD EASQLTGSIG MLPSASLGEG RAMYEPIHGS APDIAGQDKA NPLATILSVA MMLRYSLGAE LWAQRVEAAV QRVLDQGLRT ADIAAPGAPV IGTKAMGAAV VDALNFKD
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