| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1732 |
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| Symbol | |
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| ID | 6877714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1705884 |
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| End bp | 1706960 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642789601 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_002220161 |
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| Protein GI | 198283840 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00156138 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00249428 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAA TAGCCATATT TGCGGGTGAC GGCATTGGTC CGGAAATCGT GGCGGCTGCC
CGGCAAGTGC TGGATGCCGT GGATCAGGCC GCGCGGCTCG GCCTGCACTG CAGCGAGGGC
CTGGTGGGCG GCGCGGCGCT GGATGCCAGC GATGATCCCT TGCCGGCCGC CTCCTTGCAG
TTGGCTCTGG AGGCGGATGC GGTCATTCTG GGGGCGGTGG GCGGCCCCCG CTGGGACGCA
TATCCGCCCG CCAAACGCCC GGAACAGGGA TTGCTGCGCC TGCGCAAGGG GCTGGATCTC
TATGCGAACC TGCGTCCCGC GCAGATTTTT CCGCAGTTGC TGGATGCTTC CCCGTTACGC
CCGGAGCTGG TGCGCGATGT CGACATCCTG GTGGTGCGCG AGCTGACCGG GGATATCTAC
TTCGGTCAGC CGCGTGGTCT GGAAGTGGTC GATGGCAAGC GTCGCGGCTT TAACACCATG
GTCTATGACG AGGATGAAAT CCGCCGCATC GCCCATGTGG CCTTCCGCGC TGCCCAGGGG
CGTCGCAAGC AGTTGTGCTC GGTGGACAAG GCCAATGTCC TGGAGACCAC ACGTTTGTGG
CGCGAGGTGG TCACCGAGGT GGCGCAGGAC TATCCCGATG TGCAGCTCAG TCACATGTAT
GTGGATAATG CCGCCATGCA ACTAATCCGT GCCCCGGCAC AGTTCGATGT GCTGCTGACC
GGCAACATGT TCGGTGACAT TCTTTCTGAC GAGGCTAGTC AGTTGACCGG CTCCATCGGC
ATGCTGCCCT CGGCCTCACT GGGCGAGGGC CGGGCGATGT ATGAGCCCAT CCACGGCTCG
GCGCCGGACA TAGCCGGGCA GGACAAGGCG AATCCCTTAG CCACGATTCT GTCCGTGGCG
ATGATGCTGC GGTATTCTCT CGGTGCCGAG CTCTGGGCGC AGCGGGTGGA GGCGGCGGTG
CAGCGAGTAC TGGATCAAGG CCTGCGTACT GCAGATATCG CGGCGCCGGG AGCGCCGGTG
ATCGGCACCA AAGCCATGGG TGCCGCGGTG GTCGACGCCC TGAACTTCAA GGATTGA
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| Protein sequence | MKKIAIFAGD GIGPEIVAAA RQVLDAVDQA ARLGLHCSEG LVGGAALDAS DDPLPAASLQ
LALEADAVIL GAVGGPRWDA YPPAKRPEQG LLRLRKGLDL YANLRPAQIF PQLLDASPLR
PELVRDVDIL VVRELTGDIY FGQPRGLEVV DGKRRGFNTM VYDEDEIRRI AHVAFRAAQG
RRKQLCSVDK ANVLETTRLW REVVTEVAQD YPDVQLSHMY VDNAAMQLIR APAQFDVLLT
GNMFGDILSD EASQLTGSIG MLPSASLGEG RAMYEPIHGS APDIAGQDKA NPLATILSVA
MMLRYSLGAE LWAQRVEAAV QRVLDQGLRT ADIAAPGAPV IGTKAMGAAV VDALNFKD
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