| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1714 |
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| Symbol | |
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| ID | 6877696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1686423 |
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| End bp | 1687373 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789583 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_002220143 |
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| Protein GI | 198283822 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.611616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTTT TCAAAGTCCG TACCCATGTA GACTTCATGT CCAGACGCTG GATTTTTCTG
GGCGTGTCCG CTCTGCTGAT CATCGCCTCC GTCGCCGTTT TTCTGGTGCG GGGGCTGAAT
TACAGCATCG ATTTCACCGG TGGTACGCTG GTGGAACTGG CATTCAGCAA GACGCCGGAT
CTGGGCGCGG TGCGGGGTAC CCTCACCCAG GCGGGCTTCC ACGATGCGGT AGTGCAGACC
TTTGGTGGTG ACCGCGACCT GCTGATTCGC CTGCGCACCG TACCCGGTGA GAGCAGCGCC
GTGGGCAATA CGATTCTGCA GGTATTCCGG AAGGATCAAG TGGAGTATCC CGATGTGCAG
TTGCGCCGCA CCGAATATGT TGGTCCGGAG GTGGGTAAGG AATTGCGGAA CAAGGGGATC
ATGGCGCTGA TCATCGTCAC TCTGGGTATT CTGATTTATG TGGGGTTTCG CTTTGAGTGG
CGTTTCGCCG TGGGCGGTGT GCTCGCCATG CTCCACGACC CGATCCTGGT GGTGGGCTTT
TTCGCCATCA GCCACGAAGA GTTTTCCCTG ACCGTGATTG CGGCGTTGCT GGTGATCATG
GGCTATTCCC TCAATGATAC GGTGGTGGTT TTCGACCGTA TGCGCGAGGA TCTGCGGGCG
TCCCGCAGCG GTGATGTGGC GCAGATATTC AACGTCGCCA TCAACGAGAC GCTATCCAGA
ACGGTGATCA CCAGCTTCAT CACCTTCATG GTCGCGCTTT CGCTCTTCCT TTTTGGTGGG
CCGGTGATTC ACGGGTTTGC CACGGCGCTG GTCATCGGCG TGGTGGTGGG TACCTATTCC
TCGATTTTCG TCGCGAGCCC GATCGCACTG TGGCTGGGGC TCAAGCGGGA GCACGTCCTC
AAACGTCAGT TCATCAGTGC CAAGGATCGT AACGACGGTG CGGCCTTGTA G
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| Protein sequence | MELFKVRTHV DFMSRRWIFL GVSALLIIAS VAVFLVRGLN YSIDFTGGTL VELAFSKTPD
LGAVRGTLTQ AGFHDAVVQT FGGDRDLLIR LRTVPGESSA VGNTILQVFR KDQVEYPDVQ
LRRTEYVGPE VGKELRNKGI MALIIVTLGI LIYVGFRFEW RFAVGGVLAM LHDPILVVGF
FAISHEEFSL TVIAALLVIM GYSLNDTVVV FDRMREDLRA SRSGDVAQIF NVAINETLSR
TVITSFITFM VALSLFLFGG PVIHGFATAL VIGVVVGTYS SIFVASPIAL WLGLKREHVL
KRQFISAKDR NDGAAL
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