Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1683 |
Symbol | |
ID | 6877664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1644825 |
End bp | 1645649 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642789551 |
Product | hypothetical protein |
Protein accession | YP_002220112 |
Protein GI | 198283791 |
COG category | [S] Function unknown |
COG ID | [COG0393] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.187781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGATA CCGCTGAACA ACTGGCTCCT CATGCCGTCG AACGTCTGAA GGGTTTACGC TCGCAGGGCA GCCATGAGGG CATTTTTACC TCTGATCTCT CCGTCAATGA GTTCGTCATG GTCCGCAAGG CCAATTTTGA GCCATTGGGG CTGGTAGTAG GCTCGTGTAT TTACCACATG GGTATTCAGT ATGGAAACTG GAACCAGAAC ATGGAGATGG ACGTTCTTTC TCAGGCGATG TATCAAGCGC GTGAGCTGGC CATGAGCCGC ATGGAACAGG AGGCCATCCT GCTACAGGCG GATGGTATCG TCGGTGTGCG CCTGGAAGTC AAACGCATGG AATGGGATCA GGAAATTCTC GAATTCATGG CGATTGGTAC AGCCATCGCG CATCGCAGCG GCGCCTCCGG TTTCAAGGGG GTGGGGGGCA AACCCTTTAC CAGCGATCTC AGTGGGCAGG ATTTCTGGAT GCTGCTGCAG GCGGGTTACC GGCCGATGGA AATGGTGATG GGTTCCTGTG TGTACCATGT CGCCCACCAG GGGATGTTGA AATCCCTGGG CAATGTCGGA CGCAATACGG AAATGGAGCA ATTTACCCAG GCCATGTATG ACGCCCGTGA ATTGGCGATG GAACGGATGC AACATGAGGC CCAGGAGGCA CAGGCGGACG GCATTACCGG CGTACAACTG CATGAAGGCA GTCATAACTG GAAGCCGCAT ATCATCGAGT TTTTTGCGGT GGGCACGGCA GTGAAGGCCA TGGAAAATGC CGATGCGCTG GTTGATGCCC TGAGTCCGCA ACTGGTGATT CCGGTGAATG ATTGA
|
Protein sequence | MTDTAEQLAP HAVERLKGLR SQGSHEGIFT SDLSVNEFVM VRKANFEPLG LVVGSCIYHM GIQYGNWNQN MEMDVLSQAM YQARELAMSR MEQEAILLQA DGIVGVRLEV KRMEWDQEIL EFMAIGTAIA HRSGASGFKG VGGKPFTSDL SGQDFWMLLQ AGYRPMEMVM GSCVYHVAHQ GMLKSLGNVG RNTEMEQFTQ AMYDARELAM ERMQHEAQEA QADGITGVQL HEGSHNWKPH IIEFFAVGTA VKAMENADAL VDALSPQLVI PVND
|
| |