| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1660 |
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| Symbol | |
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| ID | 6877640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1628703 |
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| End bp | 1629989 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642789527 |
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| Product | outer membrane porin |
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| Protein accession | YP_002220089 |
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| Protein GI | 198283768 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.133249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.448938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC CGATTTTGGC CGCGATTCTT TCCGCTACTC TGGCGGCTCC CGCTTTGTCC
CATGCGGAAA CCCTCAAGGA TTGGCTCATG CAGAGCCAAG TGAGCGGCAA CATTCGATCC
TATTATTTCA ATCAGCTCTA TGGCGGCTCG TCGCTGCCCG ATAAGTATGC CTATTCCCTG
GGCGGCATGC TCAGGGTGCA GACGGCTCCC GTCTACGGGA TAAGCGCGGC AGTGGCCTTC
TACACGGCCA ACGACCTGGG GGCGAACGAC ACCGGCGGCG GGCAGAGTCA TCTGGACCCC
CTGCTTATGG GTGACCGCAC CTCCCTCAAC GTTCTGGGGC AGGCTTATCT ACAGTACCAA
GACCCGTGGG TGCAGTTGCG GGTGGGGAAC CTACTCCTCA ATACCCCGTG GATGAACCCC
TCGGACGCCT TCATGATCCC CAGTACCTTT CAGGCGGTAG CGATACGGGT GACCCCCATC
AAAAATCTCC AGATCATCGG TATCCGTGAA TTCCGCTTCA AAAACCGCAT TCAGGCCGAC
TATCACCGCC AGACCCTGCT GAATTTCAAC GATCATTACA GCTATCTACC CGACAATAGC
ATCGGCACCC TGGCCTTTGG CCTCAAAGGG CGTCTCATGG GTGTCCACGC GACCGCCTGG
TTCTATCGCT TTTACGGTCT CACGAACATG TTCTATGGCA CTCTGGGTTA CACCACTCCA
ACCCTGGTGG GGCATTTCCG GCCCTTCGCC GATTTTCAGT ATGACCGGGA ATGGGCCAAC
GGCGCGCAAC TGGCGGGGCC GGTGAATTCC ACGGTCTACG GCGGTATGGC GGGGATTCAG
GGAGATTTCG ACGGTGTGAC GGGGCAGATC TTCGCCGCTT ATGACCAGAT TCCCTCCCGC
GCCGTCACCT TGGCCAACGG CCAGACCTTG TACAACGGGG GCTTCATCTC ACCCTATACC
CAGCAATACA GCGCCGACCC TCTGTACACC AGCATCATGG ATTACGGTCT GGTGGACGCG
TCCGCCTCGG GCCACGCCTG GAAATTCGGT TTCTTGCTGC ATCCCCTCCG CCAGGTGCGC
ATCAAATATT CGTACAGCAT GTATGATACC GCGCCCTATC TGCCCAATGT GGACGCCAAT
TACCTGGATG TGACCTACAG CCCGGGCGGC TTCTGGAAAG GCCTATCCCT GCGTAACCGC
CTCGCCCTCG ATCACAGCAA TCCCTATGGG GGCTATCACG GTACCTTCAT CGATGATCGC
TTGATGCTGC AATACCGCTT TTCGTGA
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| Protein sequence | MKKPILAAIL SATLAAPALS HAETLKDWLM QSQVSGNIRS YYFNQLYGGS SLPDKYAYSL
GGMLRVQTAP VYGISAAVAF YTANDLGAND TGGGQSHLDP LLMGDRTSLN VLGQAYLQYQ
DPWVQLRVGN LLLNTPWMNP SDAFMIPSTF QAVAIRVTPI KNLQIIGIRE FRFKNRIQAD
YHRQTLLNFN DHYSYLPDNS IGTLAFGLKG RLMGVHATAW FYRFYGLTNM FYGTLGYTTP
TLVGHFRPFA DFQYDREWAN GAQLAGPVNS TVYGGMAGIQ GDFDGVTGQI FAAYDQIPSR
AVTLANGQTL YNGGFISPYT QQYSADPLYT SIMDYGLVDA SASGHAWKFG FLLHPLRQVR
IKYSYSMYDT APYLPNVDAN YLDVTYSPGG FWKGLSLRNR LALDHSNPYG GYHGTFIDDR
LMLQYRFS
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