Gene Lferr_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1659 
Symbol 
ID6877639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1628085 
End bp1628570 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID642789526 
Producttranscriptional regulator, AsnC family 
Protein accessionYP_002220088 
Protein GI198283767 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.31019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.273663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGA AATCCCCTGC CAGCGAATTA GATCGCTACG ACCGCCGCAT TCTGGAGGAA 
CTACAGCGCG ACGGCGGACT CAGCAATCAG CGTCTCGCCG AGCGTATCGC TTTGTCCCCC
TCCCCCTGCC TGCGCCGGGT GCAGGCGTTG GAAGAAGCCG GGATCATCCG CAAGCGTGTG
GCTCTGCTGG ACCCGCAACG TCTGGGCCTG GCGCTGATGG TGCTGATGCA CATCAGCATG
GACCGCCATA CCCCCGAGCG CTTTGAGCAT TTTGAGGCAG AAATCAGCAA CTCGCCGGAG
GTGCTGGAGT GCTACCTCAT CACGGGCCAT GATGCGGATT ACCAGATCAA GGTCGCCGTG
CGCGATATGG CGCATTTCCA GGATTTTCTG CTCCATCGCC TGACACGCAT CGAGGGGGTG
ACCGGCGTGC ATTCCAGCTT TGTGCTGCGC AGGGTGGTGG ATACGACAGA GTTGCCGGTG
TATTGA
 
Protein sequence
MKSKSPASEL DRYDRRILEE LQRDGGLSNQ RLAERIALSP SPCLRRVQAL EEAGIIRKRV 
ALLDPQRLGL ALMVLMHISM DRHTPERFEH FEAEISNSPE VLECYLITGH DADYQIKVAV
RDMAHFQDFL LHRLTRIEGV TGVHSSFVLR RVVDTTELPV Y