Gene Lferr_1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1650 
Symbol 
ID6877630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1620838 
End bp1621284 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content52% 
IMG OID642789517 
Producthypothetical protein 
Protein accessionYP_002220079 
Protein GI198283758 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.43475e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.043655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCATG TTTCACGCAA TATCTTGTTA GGATTAGCTG TTTTTATTTT CGGCAGCACC 
TTGGCCCTGG CCGACATGGG GTCGTCCGTA GGGCCTGTTC CACAGCCTGC CGGCACAACG
GCTCAACCTG GCCAGGGCAC CGCTGCCCCG ATGATGCCGG TACAGCCGGC TCAGGGTCCT
CATGTGGGTC ACAAGGAGTT GCATCACTTT GCATCGGCCA TCGTGGCTAT TCGTCCGATC
GACAAGAAGG TGCGTCAGGA GATGTCCACG AAAAAAATGA CCGTCGCGCA ACATCATCAG
ATGCTCGTGA AATACGGAAC GCAAATAAAG CATGTTTTAG TTCAGAACCA TCTCACGCCA
GTGAAATATG AAATGTTGTT GAAAAAGGCG CAGACAGACC CGGCGTTTGC TCAGCGTACG
GAAGCTGTCA TGAAGTCCAT GGGTTAG
 
Protein sequence
MYHVSRNILL GLAVFIFGST LALADMGSSV GPVPQPAGTT AQPGQGTAAP MMPVQPAQGP 
HVGHKELHHF ASAIVAIRPI DKKVRQEMST KKMTVAQHHQ MLVKYGTQIK HVLVQNHLTP
VKYEMLLKKA QTDPAFAQRT EAVMKSMG