| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1647 |
|---|
| Symbol | |
|---|
| ID | 6877627 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1617338 |
|---|
| End bp | 1617709 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642789514 |
|---|
| Product | thioredoxin |
|---|
| Protein accession | YP_002220076 |
|---|
| Protein GI | 198283755 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | [TIGR01068] thioredoxin |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.019473 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00109876 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATAG TAGAACTCAC GCAAGATAAT TTCGACGCCG TCGTGGCTGG AAACGACATG
GTGCTGATCG ATTTCTGGGC GCCCTGGTGT GCACCCTGCC GCGCTTTCGC GCCCATTTTT
GAGGCCGCTG CTGAGAAGTA TCCGGATGTG GTATTTGCCA AGGTGAATAC GGACACCGAG
CAGGAACTTG CAACTTCTTT TCAGATCCGT TCCATTCCCA CCCTGACCAT CTTCCGCCAG
CAGATCGGTA TTTTCTCTCA GGCGGGCTCA CTCCCGGCCA GCGCGCTGGA AGAAGTGATT
CAACAGGCCC GGGCACTGGA TATGGACAAA GTCCGCGAAG AAATCTCCGC TCAGCCGGAT
ACAACGCACT GA
|
|---|
| Protein sequence | MAIVELTQDN FDAVVAGNDM VLIDFWAPWC APCRAFAPIF EAAAEKYPDV VFAKVNTDTE
QELATSFQIR SIPTLTIFRQ QIGIFSQAGS LPASALEEVI QQARALDMDK VREEISAQPD
TTH
|
|---|
| |