Gene Lferr_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1639 
Symbol 
ID6877619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1608861 
End bp1610024 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content62% 
IMG OID642789506 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002220068 
Protein GI198283747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000052995 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGGCAG ATCGGGAAGG GGGCTGGCTC GCCGCCTTCT ATTTCCTGTA CTTTTGCGCG 
CTGGGGGCGT TCATGCCCTA CTGGGGTCCA TGGCTGCATG CCCAGGGCCA GAGTCCTCTG
GCGATTGGAA TTCTCACCGC GGCCGTGCAG TTCAGCAAGG TGCTGGCGCC CAATCTCTGG
GGCTGGCTGG CGCATTTTTG GGGAAGTCGG CGGATCGTCC CCTGGGCGGC GCTGATTACT
GCAGCGGGCT TCCTTGCCCT GGGGTTGGCC CATGGTAACT TTTCGGCCTT GCTGCTGATC
ACGCTGACGT TTTCCTTCTT CTGGGCAGCA ACGCTACCCC TGGTGGATGC TACCACCATG
GACTGGGCAC AACGCTGTGG CGCCGCCTAT GGGCGTATTC GACTCTGGGG CTCCCTTGGA
TTTATCGCCT TGTCGCTGGG CATGGGCGGG CTGCTTGCCC ATTGGGGAAT GACCGCGTTT
TTGCCCGGTA TCGCCATTTT TCTGGTGGCA GCATGGGGAG CGAGTCGTTA TCTGCCCTAT
GGCACGCTGC CAGACGCCAA TGCGCCGCGC CCCCGTCTCA GCGGCACACT CCGCCAGGTG
AGTCTCTGGT TTTTCCTGCT GGCGGGTTTG CTGGAGCAGG CCAGTCATGG CGCCTATTAC
GCGTTTTATT CTATCTATGC GGAACAACAT GGCCTGGGCA GTGCCGCAAT CGGGATGCTA
TGGGGTTTTG CCGTGCTCTG TGAGGTGGCC TTTTTCTGGT GGGGCGATCG TCTTATCCGG
CGCCTCGGCG TATCACTGGT TTTCACTGGC GCCTTCGTGC TGACCGCTCT GCGCTGGGGT
GTGATCGCCT GGTGGCCGGG GCTGGTGTGG ATCATACTCG TGCAAAGCCT CCATGCGGCC
AGCTATGCAG CCTTCCATCT GGCGGCGGTA CACTGGGTGT CGGGGCGCTT CCCCGGCGCT
CTGCGCGCCC GGGGTATGGC GCTCTATGCC AGCGTTGTTT ACGGACTGGG CGGAGGGCTG
GGAGCCCTGG GGGCGGGCTG GACCTGGGCT CACTGGGGTG GGCAGAATAC CTTTGCCGCA
GCGTCGGCGC TGGCGCTTTT TGGGGGGGTA TTTCTGATCC AGGCATTACG GCCGGCCCCT
ACTCTTGAAA AAGAGGCCGA TTAA
 
Protein sequence
MQADREGGWL AAFYFLYFCA LGAFMPYWGP WLHAQGQSPL AIGILTAAVQ FSKVLAPNLW 
GWLAHFWGSR RIVPWAALIT AAGFLALGLA HGNFSALLLI TLTFSFFWAA TLPLVDATTM
DWAQRCGAAY GRIRLWGSLG FIALSLGMGG LLAHWGMTAF LPGIAIFLVA AWGASRYLPY
GTLPDANAPR PRLSGTLRQV SLWFFLLAGL LEQASHGAYY AFYSIYAEQH GLGSAAIGML
WGFAVLCEVA FFWWGDRLIR RLGVSLVFTG AFVLTALRWG VIAWWPGLVW IILVQSLHAA
SYAAFHLAAV HWVSGRFPGA LRARGMALYA SVVYGLGGGL GALGAGWTWA HWGGQNTFAA
ASALALFGGV FLIQALRPAP TLEKEAD