| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1638 |
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| Symbol | |
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| ID | 6877618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1606221 |
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| End bp | 1608821 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642789505 |
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| Product | ATP-dependent chaperone ClpB |
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| Protein accession | YP_002220067 |
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| Protein GI | 198283746 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000923416 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTACCG ACAAACTGAC TACCAAATTC CAACAGGCTT TTCAGGATGC TCAGAGTCTT
GCGCTGGCGC AGGATCACCA GCAGATGGAG CCCATCCACT TGCTTGCTGC TTTTCTTGAT
CAGGAAGGAG GTATCGCTCG GCCACTCCTG TCAAAGGCCG GCGTGCGGGT CGATGCCCTA
CGCAACCAGT TGAACCGCGC GCTGGAGTCC ATGCCGAAGG TACAAGGGCA TCCGGGCGAG
GTGCAGGTGG GCCGCGATCT TACCAATATG CTCAATCTGG CAGACAAGAT AGGCCAGAAG
CGCGGCGACA CGTATATCTC CACCGAACAC TTCCTGCTGG CCTTGATGGA CGACAAGGGC
GAGGCGGGGC GCCTCCTGAA AGAGGCGGGT GCCACCACCA AGGATCTGGA ACAGGCCGTC
CACGATCTGC ACGGCGGGGA AAAAATCAAT GATGCCAATG CCGAAGAGCA ACGTCAGGCA
CTGGAGAAAT ATACCATTGA CTACACCGAA CGGGCCAGTC AAGGCAAGCT GGACCCGGTG
ATCGGCCGTG ACGACGAAAT CCGCCGGACC ATTCAGGTAT TGCTGCGGCG CAGCAAAAAT
AATCCGGTGT TGATCGGTGA ACCAGGTGTG GGCAAAACCG CTATTGTCGA GGGCCTGGCA
CTGCGCTTGA TTAATGGCGA AGTGCCCGAA TCTTTGCGCG ATAAGCGCCT TCTGGGTTTG
GACTTGGGGG CACTGATTGC CGGTGCCAAG TTTCGCGGTG AGTTCGAGGA ACGTCTGAAG
TCGTTATTGA ACGACCTGGA GAAGAGTGAG GGTAAAATCA TTCTTTTTAT TGATGAAATT
CATACGCTGG TGGGGGCTGG CAAGGCCGAG GGCTCCATGG ACGCGGGCAA TATGCTCAAG
CCGGCGCTGG CGCGCGGCGA GTTACATTGC ATCGGTGCCA CCACACTGGA TGAATATCGT
AAATATATTG AAAAAGATGC GGCGCTGGAA CGACGTTTCC AGCGGGTGCT GGTGGATGAA
CCCAGTGTGG AAGACGCCAT CGCCATTTTG CGTGGCCTGA AAGAACGCTA TGAAGCTCAT
CATGGGGTAC GCATTACCGA TCCGGCGCTG GTCGCCGCAG TGCAGCTTTC ACACCGCTAT
ATCACCGACC GTAATCTGCC TGACAAAGCC ATAGATCTGA TGGATGAAGC GGCCTCCCGC
ATCAAGATGG AAATCGATTC CAAACCTCAG GAACTGGATG AACTGGAGCG CCGTATCATT
CAGTTGAACA TCGAGCGCGT GGCGCTGGAG AAGGAGAAGG ATGAGGCCAG CCGTAAGCGC
CTGGATATTC TGCAGGCCCA AATCAAAGAG TCAGATCGAA AATATCAGGA GCTGGAAGAA
GTTTGGAAAG GCGAAAAGCT GGCTATCGAA GGTACCTCAC AGATTCAGAA AGAACTGGAT
CGCAAGCGCG TGGAGCTGGA CACGGCGCGT CGTGCCAACG ACTTGGAGCG TATGGCGGAA
CTGCAATACA GCTCTATTCC GGCATTGGAA GCACAGCTCC ATGCCGCTGA AATCCATGCG
CAATCAGCAG GTTCAGGCGC TAAACCCACG TTGTTGCGCA CCGAGGTGGG TGAAGAGGAA
ATCGCCGAAG TGGTGGCCCG CTGGACCGGC ATTCCTGTCT CCAAAATGCT GGAGGGTGAA
AAAGAAAAAC TCCTCAAGAT GGAGGAGCGC CTGCAGGCGC GGGTAGTGGG TCAGAGCGAG
GCGGTGGCCG CGGTATCCAA CGCCATTCGC CGCTCCCGGG CGGGGCTGTC TGACCCCAAG
CGTCCCAATG GCTCTTTCCT TTTTCTTGGC CCCACGGGCG TCGGCAAAAC GGAGTTGACC
AAGGCCCTTG CCGAATTTCT CTTCGACAGT GAAGACCACC TGGTGCGCAT CGACATGAGC
GAATTCATGG AGAAGCATTC GGTGGCACGG CTCATTGGCG CGCCTCCGGG ATACGTAGGT
TATGAAGAAG GAGGCTATCT CACTGAAGCC GTGCGGCGCA AACCGTATTC GGTCGTATTG
CTGGACGAGG TGGAGAAGGC CCACCCGGAA GTCTTCAATA TCCTCCTGCA GGTACTGGAT
GACGGTCGGC TCACCGATGG CCAGGGGCGC ACGGTAGATT TCCGCAATAC CGTCATCGTC
ATGACTTCCA ATCTCGGCTC CGACCGAATT CAGGAATTCA GTCGCAAAGG GGAGTATGAC
AGTATGCGCG TGGCGGTACT GGACGTGGTG CAGGATCACT TCCGTCCGGA GTTCCTCAAC
CGCATTGATG AGCTGGTCAT CTTCCGTCCC CTCACCGCGG TGCAACTCCG TGAGATTACC
GGGATTCAGA TGGGCTTCCT GCGGTCACGC CTGCGCGAGC GGGATATGGA TCTGGTACTC
AGTGATGGCG CACTGGACCA TCTGGCCGAG GTCGGTTATG ACCCCGTCTA CGGCGCTCGC
CCCCTGAAAA GGGTGATTCA GCGGGAGATC GAAAATCCCC TTGCCCAAAA ACTCCTGCGT
GGTGACTTCG GACCCGGTGA GATTATTGAA GTGGTTCTTG AAGGAGACCG CTTTACCTTT
GTCGGACAGC GGGTGCACTG A
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| Protein sequence | MRTDKLTTKF QQAFQDAQSL ALAQDHQQME PIHLLAAFLD QEGGIARPLL SKAGVRVDAL
RNQLNRALES MPKVQGHPGE VQVGRDLTNM LNLADKIGQK RGDTYISTEH FLLALMDDKG
EAGRLLKEAG ATTKDLEQAV HDLHGGEKIN DANAEEQRQA LEKYTIDYTE RASQGKLDPV
IGRDDEIRRT IQVLLRRSKN NPVLIGEPGV GKTAIVEGLA LRLINGEVPE SLRDKRLLGL
DLGALIAGAK FRGEFEERLK SLLNDLEKSE GKIILFIDEI HTLVGAGKAE GSMDAGNMLK
PALARGELHC IGATTLDEYR KYIEKDAALE RRFQRVLVDE PSVEDAIAIL RGLKERYEAH
HGVRITDPAL VAAVQLSHRY ITDRNLPDKA IDLMDEAASR IKMEIDSKPQ ELDELERRII
QLNIERVALE KEKDEASRKR LDILQAQIKE SDRKYQELEE VWKGEKLAIE GTSQIQKELD
RKRVELDTAR RANDLERMAE LQYSSIPALE AQLHAAEIHA QSAGSGAKPT LLRTEVGEEE
IAEVVARWTG IPVSKMLEGE KEKLLKMEER LQARVVGQSE AVAAVSNAIR RSRAGLSDPK
RPNGSFLFLG PTGVGKTELT KALAEFLFDS EDHLVRIDMS EFMEKHSVAR LIGAPPGYVG
YEEGGYLTEA VRRKPYSVVL LDEVEKAHPE VFNILLQVLD DGRLTDGQGR TVDFRNTVIV
MTSNLGSDRI QEFSRKGEYD SMRVAVLDVV QDHFRPEFLN RIDELVIFRP LTAVQLREIT
GIQMGFLRSR LRERDMDLVL SDGALDHLAE VGYDPVYGAR PLKRVIQREI ENPLAQKLLR
GDFGPGEIIE VVLEGDRFTF VGQRVH
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