Gene Lferr_1638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1638 
Symbol 
ID6877618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1606221 
End bp1608821 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content57% 
IMG OID642789505 
ProductATP-dependent chaperone ClpB 
Protein accessionYP_002220067 
Protein GI198283746 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.23416e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTACCG ACAAACTGAC TACCAAATTC CAACAGGCTT TTCAGGATGC TCAGAGTCTT 
GCGCTGGCGC AGGATCACCA GCAGATGGAG CCCATCCACT TGCTTGCTGC TTTTCTTGAT
CAGGAAGGAG GTATCGCTCG GCCACTCCTG TCAAAGGCCG GCGTGCGGGT CGATGCCCTA
CGCAACCAGT TGAACCGCGC GCTGGAGTCC ATGCCGAAGG TACAAGGGCA TCCGGGCGAG
GTGCAGGTGG GCCGCGATCT TACCAATATG CTCAATCTGG CAGACAAGAT AGGCCAGAAG
CGCGGCGACA CGTATATCTC CACCGAACAC TTCCTGCTGG CCTTGATGGA CGACAAGGGC
GAGGCGGGGC GCCTCCTGAA AGAGGCGGGT GCCACCACCA AGGATCTGGA ACAGGCCGTC
CACGATCTGC ACGGCGGGGA AAAAATCAAT GATGCCAATG CCGAAGAGCA ACGTCAGGCA
CTGGAGAAAT ATACCATTGA CTACACCGAA CGGGCCAGTC AAGGCAAGCT GGACCCGGTG
ATCGGCCGTG ACGACGAAAT CCGCCGGACC ATTCAGGTAT TGCTGCGGCG CAGCAAAAAT
AATCCGGTGT TGATCGGTGA ACCAGGTGTG GGCAAAACCG CTATTGTCGA GGGCCTGGCA
CTGCGCTTGA TTAATGGCGA AGTGCCCGAA TCTTTGCGCG ATAAGCGCCT TCTGGGTTTG
GACTTGGGGG CACTGATTGC CGGTGCCAAG TTTCGCGGTG AGTTCGAGGA ACGTCTGAAG
TCGTTATTGA ACGACCTGGA GAAGAGTGAG GGTAAAATCA TTCTTTTTAT TGATGAAATT
CATACGCTGG TGGGGGCTGG CAAGGCCGAG GGCTCCATGG ACGCGGGCAA TATGCTCAAG
CCGGCGCTGG CGCGCGGCGA GTTACATTGC ATCGGTGCCA CCACACTGGA TGAATATCGT
AAATATATTG AAAAAGATGC GGCGCTGGAA CGACGTTTCC AGCGGGTGCT GGTGGATGAA
CCCAGTGTGG AAGACGCCAT CGCCATTTTG CGTGGCCTGA AAGAACGCTA TGAAGCTCAT
CATGGGGTAC GCATTACCGA TCCGGCGCTG GTCGCCGCAG TGCAGCTTTC ACACCGCTAT
ATCACCGACC GTAATCTGCC TGACAAAGCC ATAGATCTGA TGGATGAAGC GGCCTCCCGC
ATCAAGATGG AAATCGATTC CAAACCTCAG GAACTGGATG AACTGGAGCG CCGTATCATT
CAGTTGAACA TCGAGCGCGT GGCGCTGGAG AAGGAGAAGG ATGAGGCCAG CCGTAAGCGC
CTGGATATTC TGCAGGCCCA AATCAAAGAG TCAGATCGAA AATATCAGGA GCTGGAAGAA
GTTTGGAAAG GCGAAAAGCT GGCTATCGAA GGTACCTCAC AGATTCAGAA AGAACTGGAT
CGCAAGCGCG TGGAGCTGGA CACGGCGCGT CGTGCCAACG ACTTGGAGCG TATGGCGGAA
CTGCAATACA GCTCTATTCC GGCATTGGAA GCACAGCTCC ATGCCGCTGA AATCCATGCG
CAATCAGCAG GTTCAGGCGC TAAACCCACG TTGTTGCGCA CCGAGGTGGG TGAAGAGGAA
ATCGCCGAAG TGGTGGCCCG CTGGACCGGC ATTCCTGTCT CCAAAATGCT GGAGGGTGAA
AAAGAAAAAC TCCTCAAGAT GGAGGAGCGC CTGCAGGCGC GGGTAGTGGG TCAGAGCGAG
GCGGTGGCCG CGGTATCCAA CGCCATTCGC CGCTCCCGGG CGGGGCTGTC TGACCCCAAG
CGTCCCAATG GCTCTTTCCT TTTTCTTGGC CCCACGGGCG TCGGCAAAAC GGAGTTGACC
AAGGCCCTTG CCGAATTTCT CTTCGACAGT GAAGACCACC TGGTGCGCAT CGACATGAGC
GAATTCATGG AGAAGCATTC GGTGGCACGG CTCATTGGCG CGCCTCCGGG ATACGTAGGT
TATGAAGAAG GAGGCTATCT CACTGAAGCC GTGCGGCGCA AACCGTATTC GGTCGTATTG
CTGGACGAGG TGGAGAAGGC CCACCCGGAA GTCTTCAATA TCCTCCTGCA GGTACTGGAT
GACGGTCGGC TCACCGATGG CCAGGGGCGC ACGGTAGATT TCCGCAATAC CGTCATCGTC
ATGACTTCCA ATCTCGGCTC CGACCGAATT CAGGAATTCA GTCGCAAAGG GGAGTATGAC
AGTATGCGCG TGGCGGTACT GGACGTGGTG CAGGATCACT TCCGTCCGGA GTTCCTCAAC
CGCATTGATG AGCTGGTCAT CTTCCGTCCC CTCACCGCGG TGCAACTCCG TGAGATTACC
GGGATTCAGA TGGGCTTCCT GCGGTCACGC CTGCGCGAGC GGGATATGGA TCTGGTACTC
AGTGATGGCG CACTGGACCA TCTGGCCGAG GTCGGTTATG ACCCCGTCTA CGGCGCTCGC
CCCCTGAAAA GGGTGATTCA GCGGGAGATC GAAAATCCCC TTGCCCAAAA ACTCCTGCGT
GGTGACTTCG GACCCGGTGA GATTATTGAA GTGGTTCTTG AAGGAGACCG CTTTACCTTT
GTCGGACAGC GGGTGCACTG A
 
Protein sequence
MRTDKLTTKF QQAFQDAQSL ALAQDHQQME PIHLLAAFLD QEGGIARPLL SKAGVRVDAL 
RNQLNRALES MPKVQGHPGE VQVGRDLTNM LNLADKIGQK RGDTYISTEH FLLALMDDKG
EAGRLLKEAG ATTKDLEQAV HDLHGGEKIN DANAEEQRQA LEKYTIDYTE RASQGKLDPV
IGRDDEIRRT IQVLLRRSKN NPVLIGEPGV GKTAIVEGLA LRLINGEVPE SLRDKRLLGL
DLGALIAGAK FRGEFEERLK SLLNDLEKSE GKIILFIDEI HTLVGAGKAE GSMDAGNMLK
PALARGELHC IGATTLDEYR KYIEKDAALE RRFQRVLVDE PSVEDAIAIL RGLKERYEAH
HGVRITDPAL VAAVQLSHRY ITDRNLPDKA IDLMDEAASR IKMEIDSKPQ ELDELERRII
QLNIERVALE KEKDEASRKR LDILQAQIKE SDRKYQELEE VWKGEKLAIE GTSQIQKELD
RKRVELDTAR RANDLERMAE LQYSSIPALE AQLHAAEIHA QSAGSGAKPT LLRTEVGEEE
IAEVVARWTG IPVSKMLEGE KEKLLKMEER LQARVVGQSE AVAAVSNAIR RSRAGLSDPK
RPNGSFLFLG PTGVGKTELT KALAEFLFDS EDHLVRIDMS EFMEKHSVAR LIGAPPGYVG
YEEGGYLTEA VRRKPYSVVL LDEVEKAHPE VFNILLQVLD DGRLTDGQGR TVDFRNTVIV
MTSNLGSDRI QEFSRKGEYD SMRVAVLDVV QDHFRPEFLN RIDELVIFRP LTAVQLREIT
GIQMGFLRSR LRERDMDLVL SDGALDHLAE VGYDPVYGAR PLKRVIQREI ENPLAQKLLR
GDFGPGEIIE VVLEGDRFTF VGQRVH