Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1635 |
Symbol | |
ID | 6877615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1600854 |
End bp | 1601843 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642789502 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_002220064 |
Protein GI | 198283743 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0490195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000015248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATATCG TCACTGGCGG GGCCGGTTTT ATCGGCGCCA ATCTCGTGCA GGCCCTCAAT CAACGGGGCA TTACGGATAT TCTCGTCGTC GACCATCTGA GCCGCGCCGA CAAGTTTCTC AATCTCACCG ATCTGGAAAT TGCCGACTAC ATGGAGGCAG AGGCTTTTCT TCGACTGATA GAGAACAAAC ATCTGAAGGG TGTCGAAGCC GTTTTCCATG AAGGCGCATG CTCCGATACG ATGGCGACAG ATGGCCGTTA TGTCATGGAA AACAACTTCA CCTTCAGCAA AGTGCTGCTG CATTGGTGCC AACATCATGA TGTCCCCTTC CTTTATGCCT CCAGCGCCTC GGTCTACGGC ATGACTGGTA TCTTTGTCGA GGAGCGCTAC GCCGAATCGC CCCTCAACGT CTACGGATTC AGCAAGTTTC AGTTCGACCA GTATCTCCGG CAGATCTGGA CGGATTTGCG GGCGCCGGTA CATGGCTTTC GTTATTTTAA CGTCTACGGT CCACGCGAGT TTCACAAAAA CCGCATGGCC TCAGTAGCGC TGCATTTTTA CAACCAATAT CGGCTGGACA ATCATGTTCG CCTGTTTGCC GGGTCTGGCA GCTATGCCGA TGGTGAACAA CGGCGCGATT TCATTTATAT AGACGATGTG GTTTCCGTCA ACATGCATTT CCTGGATCAC CCGCACAGCG GAATTTACAA TGTAGGCACA GGACAGGCGC AGAGTTTCAA CGAGATGGCA GTCGCCGTCA TCAATAGCTT GGAGCACCGC GCTAACCGCC CGACACTGAC CCTGCCCGCA CTGCAGAAAA CGCAGGCCAT TCGTTACGTC AATATGCCCG AAGCCCTGAA TGGTAAGTAC CAGAGCTTCA CCCAGGCGGA AATCAGTAAA CTGCGCGGTG CAGGATATGA CAGAACCTTT CTGACCGTGG GACAGGGGGT GGATCGCTAT GTGCAATGGC TCACGGAACG GACGACCTGA
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Protein sequence | MYIVTGGAGF IGANLVQALN QRGITDILVV DHLSRADKFL NLTDLEIADY MEAEAFLRLI ENKHLKGVEA VFHEGACSDT MATDGRYVME NNFTFSKVLL HWCQHHDVPF LYASSASVYG MTGIFVEERY AESPLNVYGF SKFQFDQYLR QIWTDLRAPV HGFRYFNVYG PREFHKNRMA SVALHFYNQY RLDNHVRLFA GSGSYADGEQ RRDFIYIDDV VSVNMHFLDH PHSGIYNVGT GQAQSFNEMA VAVINSLEHR ANRPTLTLPA LQKTQAIRYV NMPEALNGKY QSFTQAEISK LRGAGYDRTF LTVGQGVDRY VQWLTERTT
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