| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1623 |
|---|
| Symbol | |
|---|
| ID | 6877603 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1586742 |
|---|
| End bp | 1587167 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642789490 |
|---|
| Product | ferric uptake regulator, Fur family |
|---|
| Protein accession | YP_002220052 |
|---|
| Protein GI | 198283731 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.507578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000129248 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACA ATGACTGGAA CAAACAACGT GTGCTGGAAG TGCTCCGTGA CGCCGGAGTC
AATCCGACAA GCCAGCGTGT GGAGATTGGT TACGCGTTGT TCTCCTCTTG CGCGCACCTG
TCCGCCGAAG AGATCATGCA ACGCGTCAAT GCGGATTATC CCGTAGTATC CAAGGCGACG
GTTTACAACA CCTTGGGCCT CTTCGCCGGA CATGCACTGG TGCGGGAAGT GATTGTGGAG
CCGGGTAAGG TATTCTATGA CCCCAACGTG TCTCCTCACC ATCATTTCTA CTATGTAGAT
TCGGGAGATC TGGTGGATAT TCCGGCGTCC TCCCTGCAAA TCGGCACACT CCCTGACCTG
CCGCCGGAGA CAGAAGTGGA GAAAGTCGAG GTGGTGATAC GGCTTCGGCA GCGCGCGACG
CACTAA
|
|---|
| Protein sequence | MNNNDWNKQR VLEVLRDAGV NPTSQRVEIG YALFSSCAHL SAEEIMQRVN ADYPVVSKAT
VYNTLGLFAG HALVREVIVE PGKVFYDPNV SPHHHFYYVD SGDLVDIPAS SLQIGTLPDL
PPETEVEKVE VVIRLRQRAT H
|
|---|
| |