| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1615 |
|---|
| Symbol | |
|---|
| ID | 6877593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | + |
|---|
| Start bp | 1576064 |
|---|
| End bp | 1576600 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642789480 |
|---|
| Product | disulfide isomerase/thiol-disulfide oxidase |
|---|
| Protein accession | YP_002220044 |
|---|
| Protein GI | 198283723 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.110652 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00109876 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG TACCCGCTAA AATGACTCCG AGCGATCTCT GGAAACTGAT GGGGAAAAAA
CTTACCTATA TCCAGGAGGG CCACCATGGA CCTGTCGTTT ACGATTTTAC GGATACAAAT
TGCCCATTTT GTCATCTTAT ATATGTGGTC GAAGCCCGTC TCATTCGAGA AGGAAAATTG
ACGGTCCGCT ATGTTCCTGT CGCTATAATA AAGCCCAGCA GCATGCCGGA GGCTGCTGCC
ATATTGCAGG CTGATAACCC TGTAGCGGCC TTGCAAAAGG CCGAAGACGC CATTGATAAG
GGCATGAAGA CAGGCAAGCC AGCCAAGCTC GCACGTGCTA CGGACGCAAT CGGCAAGGCG
TCACCAAAAA CCATCGAGGC GATCAAAAAG ATAGAAGCAA ACAATGTGTT CTTGCAGGAA
GTGGATATCG ACGAGCTCCC GGATATTATC TATCTGCCCA AGAAAGGCAA GCTTGGGCTG
ATAACGGGAT TGATAAGCGA GAAGAAGCTC ACGGAACTGC TACCGCAAAT GCAATGA
|
|---|
| Protein sequence | MAAVPAKMTP SDLWKLMGKK LTYIQEGHHG PVVYDFTDTN CPFCHLIYVV EARLIREGKL
TVRYVPVAII KPSSMPEAAA ILQADNPVAA LQKAEDAIDK GMKTGKPAKL ARATDAIGKA
SPKTIEAIKK IEANNVFLQE VDIDELPDII YLPKKGKLGL ITGLISEKKL TELLPQMQ
|
|---|
| |