Gene Lferr_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1560 
Symbol 
ID6877535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1522105 
End bp1523403 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content62% 
IMG OID642789423 
ProductGTP-binding proten HflX 
Protein accessionYP_002219989 
Protein GI198283668 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000698014 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGGCCGCGC CCCGGGAGAG GATTCTGCTC GTCCATGTGG TATTACATGG AGAGGCGGAT 
CCCGACGCCG GGGCGGAGTT TTTCCATCTG GCCACCGACA GTGGTGCGGA TGTGTTGGAA
CTGCTTTCCG TTCAGCGCGG ACGTCCCGAT CCTGCGACCT TTCTGGGGCG TGGCAAGGTG
GCGGAACTGG CGGAGCGAGT TGCAGCATTG TCCGTGGATC TCGTTCTTTT CGACCGGGTT
TTGAGCCCTG TGCAGGAGCG CAATCTGGAG GGCGCCCTCC ACTGCCGGGT TGTCGACCGG
GTAGGTCTCA TCCTCGATAT TTTTGCGCGG CGGGCGCGGA CCCATGAAGG CAAACTGCAG
GTGGAGTTGG CGCAACTGAC GCGCCTTCGT ACCCGCCTTG TCCGCGGCTG GACCCATCTG
GAGCGCCAGC GCGGCGGCAT CGGATTGCGG GGTCCGGGTG AAACGCAGCT GGAAACGGAC
CGCCGTCTCA TCGGCGAACG CATTCTTTCC CTGCGCGGGC GCCTGATCAA AGTGGCTGCA
CATCGGGCAA CACAGCGGCG GGCGCGGCAG CGGGCACCCC TGCCGACGGT CGCCTTGGTC
GGTTATACCA ATGCCGGCAA ATCCTCCCTC TTCAATACCC TCACCAAAAG TTCCAGCTAC
GCCGCGGACC GTCTTTTCGC GACCCTCGAT CCCGCCATCC GGCGTTTGCA GATAGAGGGG
CATGAAGCCA TTCTCCTGGC CGATACCGTC GGTTTCTTGC GCGACTTGCC GACCGACTTG
ATTGCCGCTT TTCGCGCGAC ACTGGAAGAG GTAAACCAGG CGCAATTACT TCTTCATGTG
GTGGACAGCA GCGCGCCTGA TCGCGATGCC CAGATTGCCG CGGTAGATGC GGTGTTGAGG
GAAATTGGCG CGGAGGATAT TCCCCGCCTG CTGGTACTGA ACAAGGTGGA GCTCACCGGA
GATATGCCGG GAAACGTGTA TGAGAGCTCT GGCAAACTGG CAGCGGTGCG TGTCAGCGCG
CACTCGGGTA TCGGCATACC CGAGTTGCTG CAGGCCGTGA CACAGCGTGT GGGGCGCTCC
ATGTTGCGCG CTGATCTGAC GCTGATGCCT GAAGAAGGAG CCCTGCGTGC GCGGATACAT
CGTCTGGCCA GTGTTATCGC TGAGCGTTTC GATGAGCAGG GCAGGACACA TCTGACTTTT
GACATTGATG GTCTCAACTG GCGGCGCCTG CATACGCAGA TGCGCGATAG CGGTTGTCAG
GCGATGGACG CGCCCCCTAC AATACCGGTT GATGGCTGA
 
Protein sequence
MAAPRERILL VHVVLHGEAD PDAGAEFFHL ATDSGADVLE LLSVQRGRPD PATFLGRGKV 
AELAERVAAL SVDLVLFDRV LSPVQERNLE GALHCRVVDR VGLILDIFAR RARTHEGKLQ
VELAQLTRLR TRLVRGWTHL ERQRGGIGLR GPGETQLETD RRLIGERILS LRGRLIKVAA
HRATQRRARQ RAPLPTVALV GYTNAGKSSL FNTLTKSSSY AADRLFATLD PAIRRLQIEG
HEAILLADTV GFLRDLPTDL IAAFRATLEE VNQAQLLLHV VDSSAPDRDA QIAAVDAVLR
EIGAEDIPRL LVLNKVELTG DMPGNVYESS GKLAAVRVSA HSGIGIPELL QAVTQRVGRS
MLRADLTLMP EEGALRARIH RLASVIAERF DEQGRTHLTF DIDGLNWRRL HTQMRDSGCQ
AMDAPPTIPV DG