Gene Lferr_1479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1479 
Symbol 
ID6877453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1437113 
End bp1438033 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content62% 
IMG OID642789349 
Productaldolase 
Protein accessionYP_002219916 
Protein GI198283595 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.57412 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA TCGCCCAAGC ACCACTCGGC ATGTCCGCCG AAAGCACCCA GCGCTGGACG 
GAAAACTATC GTCTCGCCAC CCAGGACAGC GGACGCCTGT TTCTGATGGC GGGTGACCAG
AAAGCCGAAC ATCTCAACGA TGACTTTGTC GGGGGTCACG TGGCGACGGA CGATTCCGAC
CCGGAGCATC TGTTCCGCAT CGCCAGTGAA GCACCCGTGG GCTGTTTTGC CGCGCAGATG
GGCCTCATTG CCCGCTACGG CATGGATTAC CGTGACACGC CCTACTTGCT CAAGCTCAAC
AGCAAGACCC ACCTGATCAA AACGGCACAA CGTGATCCGG TCAGTCTGCA ATGGCAGAGC
ATGGCGCAGG TCCATGATTT TGTGCGCCAC TCCGGTCTCC GGGTGGTCGG GGTGGGTTAC
ACCATTTACC CTGGCTCCGA GTTCGAGCCG ACCATGCTCA GCGAAGCCGC ACGCATCATT
CAGGATGCCC ATGCCATGGG ATTGCTGGCC GTCATCTGGG CCTATCCGCG CGGCAAGGCC
GTAGGTGAAC GCGAGCAGGA CCCGCATCTC ATTGCCGGCG CCGCGGGTCT GGCGGCCTGT
CTCGGGGCGG ATTTCGTCAA GATCAACCCA CCACTCGACG CAGCGGGTGC CATGGACGGT
ACGCTCCTCG GTGAAGCCGT CGCCGCTGCC GGACGCACGC AGGTCATCTG CGCGGGGGGG
TCCGAAACCG ATGCGCCGGA GTTTCTGCAA CGCCTCTACG AACAGATTCA TGTGGGTGGC
ACGCAAGGCT GCGCCACCGG CCGGAATGTC CATCAGCGCA GTCAGCCCGA CGCGGTCAAC
TTCTGCAAGG CCATCCATGC CATTGTCGTC CACAATCAGG GCGTCGACGA AGCGGTCAAG
CTGCTGCATC CCAACGCATG A
 
Protein sequence
MPKIAQAPLG MSAESTQRWT ENYRLATQDS GRLFLMAGDQ KAEHLNDDFV GGHVATDDSD 
PEHLFRIASE APVGCFAAQM GLIARYGMDY RDTPYLLKLN SKTHLIKTAQ RDPVSLQWQS
MAQVHDFVRH SGLRVVGVGY TIYPGSEFEP TMLSEAARII QDAHAMGLLA VIWAYPRGKA
VGEREQDPHL IAGAAGLAAC LGADFVKINP PLDAAGAMDG TLLGEAVAAA GRTQVICAGG
SETDAPEFLQ RLYEQIHVGG TQGCATGRNV HQRSQPDAVN FCKAIHAIVV HNQGVDEAVK
LLHPNA