| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1470 |
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| Symbol | |
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| ID | 6877444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1428497 |
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| End bp | 1429375 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642789341 |
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| Product | RNA-binding S4 domain protein |
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| Protein accession | YP_002219908 |
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| Protein GI | 198283587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.177762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAA AATTGCAGAA GGTGCTCGCC CGCTTTGGGC TGGGGTCGCG CCGCCTCATG
GAGGAATGGA TCGCGGCGGG GCGTGTGGTG GTGAATGGCC AGATCGCCAA ACTGGGTGAC
CGGGTGACGG CACAGGATAA AATTGCTGTT GACGGGGAGA CGTTGCGAAT TCCTTCCTGG
GTACGTCCGC GCTTGCGAGT GCTGCGCTAC CACAAACCGG CGGGGGAACT CACCACCCGC
AATGACCCGG CAGGGCGTCC CACGGTTTTT GATCGCCTGC CGCGATTGCG CGGTAGCCGT
TGGATTGCGG TAGGTCGCCT CGACTACAAC ACCGAAGGGC TGCTGCTGCT CACCAATGAC
GGTGATCTGG CCAACGCGCT GATGCATCCC CGTGCCGGCA TCGAACGGGA ATACGCTGTC
CGGGTGCTGG GGGAAGTAAG TCCGGAGCAG CAGGTCCGGC TGCTACAGGG CGTAGTGCTG
GAGGACGGCG AAGCGCATTT CGTGACCTTG CAGGAAGCCG GTGGTGAAGG CGCTAATCGC
TGGTATCACG TCACTCTGGC AGAAGGGCGC AATCGTGAGG TAAGGCGACT TTTTGAGGCG
GTGGGCCTGA CCGTGAGCCG CCTGATTCGG GTGCGTTACG GGGTGGTGGA GATGCCGCGC
CTGCTCAAGA CCGGTTACTT TGACGAATTG CCCGATGAAG AACGTGACGC CCTGCTCGCC
AGTGTACAGT GGGTCAATCC CGCTACACCA CCTTCCGACA GCGTGGAACG CGTCACCGCG
CCGCTGCCGG ACGCGCGAAA AAATAACAGT CGGAGGGAAG CCCGGCAGAC GCCATCGCGT
GGCCGGCCGG GGCAGGGACG GCGAACGGTC CGGGATTAG
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| Protein sequence | MDEKLQKVLA RFGLGSRRLM EEWIAAGRVV VNGQIAKLGD RVTAQDKIAV DGETLRIPSW
VRPRLRVLRY HKPAGELTTR NDPAGRPTVF DRLPRLRGSR WIAVGRLDYN TEGLLLLTND
GDLANALMHP RAGIEREYAV RVLGEVSPEQ QVRLLQGVVL EDGEAHFVTL QEAGGEGANR
WYHVTLAEGR NREVRRLFEA VGLTVSRLIR VRYGVVEMPR LLKTGYFDEL PDEERDALLA
SVQWVNPATP PSDSVERVTA PLPDARKNNS RREARQTPSR GRPGQGRRTV RD
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