Gene Lferr_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1452 
Symbol 
ID6877426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1409969 
End bp1410973 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content57% 
IMG OID642789323 
Productglycosyl transferase family 2 
Protein accessionYP_002219890 
Protein GI198283569 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.411296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCAT CATCTCCACG ACCGGACCCG CAACACAGCA TCGTGACTGC CTCCATCATC 
GTCCCATGCC ACAACGAATC CGGGAGTCTC CAGACTCTCT ACACCCGTGT CCGTGCCGTC
ATGGACGAAG CGGGCGAGCC GTGGGAGATG ATTTGCATCA ATGACGGCAG CGGAGATGAT
ACACTATTGC AGTTGATTGC CCTGCATCAC CAGGATCGTC GGGTCAGAGT TATTGATTTA
TCCAGGAATT TTGGCAAGGA AGCGGCGCTC ACCGCCGGGC TCGATGCCGC ACTGGGAGAA
GCCGCCATTC CGCTGGATGC TGACCTGCAA GACCCGCCCG AACTGATTCC CGAGCTTCTT
GCCCGATGGC GGGAGGGGTT TGATGTGGTG AACGCCGTTC GCCTCTCCCG CGAAGGAGAA
TCATGGCTCA AACGCGCCTC TGCCCATGTC TTTTATCGGA TCATCAATCG CATGAGCGAC
GTGGGGATCC CGCCGGACAC GGGTGATTTC CGGCTGTTGT CCCGTCCGGT TCTGGAGGCC
CTGCAGGCGC TTCCCGAACG CAGACGATTC ATGAAGGGTT TATTTGCCTG GGTCGGTTTT
CGCAGCACGA ATGTGTACTA CCATCGTGCG CCTCGCCATG CGGGAAAAAC CACCTGGAGC
TATTGGCGGC TATGGAATCT CGCCGTAGAA GGTATTACTT CCTTTAGTCA GGTACCATTA
CAACTTGCCG CTTATCTGGG TTTTGCGGTT TCGCTGTTGG CCTTTCTTTA TGCCGTCTGG
CTGGTAATCA GCACCCTGGC GTACGGAAAC CCGGTAAAGG GTTATCCATC CATCATGGTT
ACCCTGTTGT TCCTGGGTGG CGTGCAGCTC ATGGCCCTGG GGGTGATCGG TGAGTACCTC
GGTCGGATCT ATGAGGAAAG TAAGCACAGA CCGATTTACC TGGTCAGACA AGTGTGGGGC
GGGGAGCATC CCACCCAGGC TGTTCAGCCG CAGGACCATC CCTGA
 
Protein sequence
MTPSSPRPDP QHSIVTASII VPCHNESGSL QTLYTRVRAV MDEAGEPWEM ICINDGSGDD 
TLLQLIALHH QDRRVRVIDL SRNFGKEAAL TAGLDAALGE AAIPLDADLQ DPPELIPELL
ARWREGFDVV NAVRLSREGE SWLKRASAHV FYRIINRMSD VGIPPDTGDF RLLSRPVLEA
LQALPERRRF MKGLFAWVGF RSTNVYYHRA PRHAGKTTWS YWRLWNLAVE GITSFSQVPL
QLAAYLGFAV SLLAFLYAVW LVISTLAYGN PVKGYPSIMV TLLFLGGVQL MALGVIGEYL
GRIYEESKHR PIYLVRQVWG GEHPTQAVQP QDHP