| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1449 |
|---|
| Symbol | |
|---|
| ID | 6877423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1406440 |
|---|
| End bp | 1406970 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642789320 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_002219887 |
|---|
| Protein GI | 198283566 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGCCT GGATCAGTAT CGGCAGCAAC CTGGACCTGC CCGTGGCGCA GGTGCGACAG
GCGCTGGAAT CCTTGGCCAC CGTACCCGAA AGCACCTTGC TGTGGCATTC CCATCTCTAC
CAGACGGCAC CCGTGGGTGG TGTTCCACAG CCTGCATTTA TCAATGCGGT CGCCCGGTTG
CAGACGGCGT TACCGGACCG CGATCTCCTC GGCCATCTGC AAATGCTGGA GGCGGCCGCG
GGGCGGCGCC GCGCCGAGGA AATTTACTGG GGTCCGCGGG TGCTGGACCT CGACCTGCTG
AGTTATGGGA ACACACACTC GACCGATCCG GAACTCACCC TGCCCCACCC CCGCCTGCAT
GAGAGGGCCT TCGTGCTTGT CCCTCTTGCC GAGTTTGATC CGGAACTGGT CATTCCCGGC
TGCGGGCGCA TCGCCCGCCA CCTGTCCGCA GTGGCCGGTC AATCCGTGAT TTGCATACCG
GACCATGCCC CAGAGATGGC TGTGTGCCAG AGCCGTTCCG TCCAGGCATG A
|
|---|
| Protein sequence | MIAWISIGSN LDLPVAQVRQ ALESLATVPE STLLWHSHLY QTAPVGGVPQ PAFINAVARL
QTALPDRDLL GHLQMLEAAA GRRRAEEIYW GPRVLDLDLL SYGNTHSTDP ELTLPHPRLH
ERAFVLVPLA EFDPELVIPG CGRIARHLSA VAGQSVICIP DHAPEMAVCQ SRSVQA
|
|---|
| |