Gene Lferr_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1302 
Symbol 
ID6877276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1262943 
End bp1263542 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID642789178 
Producthypothetical protein 
Protein accessionYP_002219745 
Protein GI198283424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.236926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.1931e-10 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGATT CTATTATGTG TATAGAAACC CTACACAACT GTCTGGTTCG CGTGCACATG 
AAACGACTGG ATCTGCTGAA TCGCCTATCC GCCCTGGAAC AGAAGGGGCT TGTCGTCTAT
TCCAGACGAG ACCTGGAGAA GATTTTTCCG GAAGAGGATG AGAAAGCGCT GGAGAAGAGC
TTGCAACGCA TGTGCCAGGA CAACCTTCTG GTTCGCGCCG CTCGCGGCAT CTACGTTTTT
GGTCCAGCTG TGCCGCGTCA CCGGGGCTGG CTGATCGAGC GGATCGCGCA GGCCCTGCGC
CCGGGAGATT TCAATTACGT TTCTCTGGAA AGTATTCTCT CGGAATATGG TGTGATCTCA
CAGATTCCTG TGGATCGCTT GACGGTAATG ACCACAGGCG CGAAAGGACT CCACAAGACC
CCCTTTGGGG CTATTGAATT CACGCACACC AAGCGCACTA TTCCGGATCT TCTGGAAAGA
ACATTAGTCG TCAAGGGGCG TCCATTGCGT ATTGCCAGAA AGCAGGCTGC CATCCAGGAT
CTCCATCGTG TAGGACGGAA CATAGACTTG ATTGATCGGG ACGAGGTGGA TGATGAATAA
 
Protein sequence
MADSIMCIET LHNCLVRVHM KRLDLLNRLS ALEQKGLVVY SRRDLEKIFP EEDEKALEKS 
LQRMCQDNLL VRAARGIYVF GPAVPRHRGW LIERIAQALR PGDFNYVSLE SILSEYGVIS
QIPVDRLTVM TTGAKGLHKT PFGAIEFTHT KRTIPDLLER TLVVKGRPLR IARKQAAIQD
LHRVGRNIDL IDRDEVDDE