Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1238 |
Symbol | |
ID | 6877211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | - |
Start bp | 1203773 |
End bp | 1205332 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642789115 |
Product | nitrogenase molybdenum-iron protein beta chain |
Protein accession | YP_002219683 |
Protein GI | 198283362 |
COG category | [C] Energy production and conversion |
COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
TIGRFAM ID | [TIGR01286] nitrogenase molybdenum-iron protein beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.028424 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAGA ATGCTGAAAA AGTGCTTGAT CACTTCAATC TGTTCCGTGA ACCGGAATAC CAGGAGATGT TCAAGAACAA GAAGGCACAA TTTGAAAACC CGGTACCACA GGACAAGCTC GTGCAGGTTC GTGAATGGAC AAAGACGTGG GATTATCGGG AAAAGAACTT TGCCCGTGAG GCCTTGACGG TAAATCCCGC CAAGGCCTGC CAACCCCTCG GTGCCGTGTT TGCCGCGGTG GGTTTTGAGA GCACCTTGCC CTTTGTGCAT GGTTCGCAGG GTTGCGTCGC CTATTATCGC AGTCATCTGA GTCGGCACTT CAAGGAGCCC ACCTCCTGTG TGTCGTCTTC CATGACCGAG GATGCCGCCG TATTCGGGGG CCTCAACAAC ATGGTGGACG GACTCGCCAA CGCCTACGCC ATGTACAAAC CCAAGATGAT TGCCGTTTCC ACCACCTGTA TGGCGGAAGT GATCGGTGAC GACCTGAACG CCTTCATCAA AACCTCCAAG GAAAAGGGCA GCGTACCAGA AGAATATGAT GTGCCTTTCG CCCATACTCC GGCCTTCGTC GGCAGCCATG TCACCGGCTA TGACAATGCT CTGAAGGGTG TACTGGCGCA TTTTTGGGAC GGTAAGGCGG GTACCGTACC AGCACTCGTG CGCGAACCCA ACGAGAAGAT CAACTTCATT GGCGGTTTTG ACGGTTATAC CGTCGGTAAC ACCCGGGAAG TGAAGCGCAT CCTGGACCTT ATGAAGCTGG AATATACGAT CCTGGCCGAC ACCAGCGATG TCTTTGATAC GCCGAGCGAC GGGAAATTCC GCATGTATGA TGGCGGCACC ACCCTGGAAG ATACGGCGGC AGCCCTGAAT GCCAAGGCCA CTTTCTCCAT GCAGGAATAT TGCACGGAAA AGACTTTGCC TTTCATTGCA GAGCACGGTC AGGAAGTCGT CGCCCTGAAT TGCCCCATCG GCGTATCGGG TACGGACAAA TTCCTTATGG AATTGTCCCG CGTCAGCGGC AAAGCGATTC CCGATGAACT GAAAAAGGAA CGCGGGCGTC TGGTGGATGC CATTGCGGAT TCCACAGCGC ACATTCATGG CAAAAAGTTC GCCATCTACG GTGATCCGGA TCAGTGCCTC GGTCTGGCGG CCTTTCTGAT GGAACTGGGC GGCGAACCCA CCCATGTGCT GGCCACCAAT GGATCCAAGC ATTGGGCGGA GAAAGTGCAG GCATTGTTCG ACAGCTCACC CTTCGGCAAG GATTGTCATG TCTATGCCGG CAAGGATCTC TGGCATATGC GCAGTCTGCT GTTCACCGAG CCGGTGGATT TCCTCTTTGG CAATACCTAC GGGAAATATC TCGAACGCGA TACGGGTACG CCCCTGATCC GTTACGGCTT CCCGATCTTC GATCGCCATC ATCATCACCG TTATCCCATT TGGGGCTATC AGGGCGGCCT GAATATGCTG GTTCGCATAT TGGACAAGAT TTTTGATGAG ATCGATAGCA ACAGTAATGT GCCGAGTCAG AGCGATTACA GTTTCGACAT TATTCGTTAA
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Protein sequence | MSQNAEKVLD HFNLFREPEY QEMFKNKKAQ FENPVPQDKL VQVREWTKTW DYREKNFARE ALTVNPAKAC QPLGAVFAAV GFESTLPFVH GSQGCVAYYR SHLSRHFKEP TSCVSSSMTE DAAVFGGLNN MVDGLANAYA MYKPKMIAVS TTCMAEVIGD DLNAFIKTSK EKGSVPEEYD VPFAHTPAFV GSHVTGYDNA LKGVLAHFWD GKAGTVPALV REPNEKINFI GGFDGYTVGN TREVKRILDL MKLEYTILAD TSDVFDTPSD GKFRMYDGGT TLEDTAAALN AKATFSMQEY CTEKTLPFIA EHGQEVVALN CPIGVSGTDK FLMELSRVSG KAIPDELKKE RGRLVDAIAD STAHIHGKKF AIYGDPDQCL GLAAFLMELG GEPTHVLATN GSKHWAEKVQ ALFDSSPFGK DCHVYAGKDL WHMRSLLFTE PVDFLFGNTY GKYLERDTGT PLIRYGFPIF DRHHHHRYPI WGYQGGLNML VRILDKIFDE IDSNSNVPSQ SDYSFDIIR
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