Gene Lferr_1230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1230 
Symbol 
ID6877203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1198667 
End bp1198975 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content57% 
IMG OID642789107 
Productferredoxin III, nif-specific 
Protein accessionYP_002219675 
Protein GI198283354 
COG category[R] General function prediction only 
COG ID[COG3383] Uncharacterized anaerobic dehydrogenase 
TIGRFAM ID[TIGR02936] ferredoxin III, nif-specific 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000308557 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCACGACA TAACCGGCAT CACCAAGGGG GGACTCGGCT GGACCCCCCA GTTTGTCGAA 
CATATCAACC AGGAAAAGTG CATCGGCTGC GGGCGTTGTT TCCGCGCCTG CGGTCGGGAT
GTGCTGAACC TTGTTGGTAT CACTGAAGAA GGGGAACTGG TGGCGGCAGA CGATGACGAA
GCAGAGCGCA AATTCATGAA GATTGCGCAT CCCGAAAAAT GTATCGGCTG CGAGGCATGC
TCCCGGGTTT GCCCCAAAAA CTGCTATACC CACGCGTCCA TGTCCCTGGC GGTCAGCGTC
TCGGCATAG
 
Protein sequence
MHDITGITKG GLGWTPQFVE HINQEKCIGC GRCFRACGRD VLNLVGITEE GELVAADDDE 
AERKFMKIAH PEKCIGCEAC SRVCPKNCYT HASMSLAVSV SA