Gene Lferr_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1216 
Symbol 
ID6877189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1186218 
End bp1187141 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content57% 
IMG OID642789093 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002219661 
Protein GI198283340 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0725] ABC-type molybdate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000268953 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000401052 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAAACACC GTCACTATCA AAGTTCCCTT GCACTGATCG TCGCCGCCAG CCTGCTGGGT 
TTATCGCCCC AAGCCATGGC CAAAGACCTG CATGTCGCTT ACGCAGGCTC CATGGGTACG
GTCATGGACC TGCATCTCGG ACCGGCCTTC GCCAAAGCCC ATAGCGTGCA CTACCAGGGG
GAGGGTCAGG GCGCTTATGG CCTCGCCCGG CTCATCGCCG CCCACAAACT GCGCACCGAC
GTTTTTGTCT CCATCACCCC CGGCCCCATC GAGGTGCTGA TCAAGGCCGG CCTGGTCAAG
AAGGCCTTCC CGGTCGCCAG TACTGCCATG TGCATCGCTT ATAGTCCCAA CAGCCCCTAC
GCCAAAGATT TCAAGGAAGC CGCGGAAGGC AAGGTGCCGT GGTATGAAAT CCTGAAGAAG
CCGGGGGTGA TCTTCGGTCG CACAGATCCC AAAACCGATC CCCAAGGGCA AAATATCGTC
TTTACCTTCA TGCTGGCGGA AAGGTATTAC CACCAACCGG ATCTAGTGAA CAAAATCCTC
GGTCCGGTCG AGAACCCCCG GCAGATATTC ACGGAAGCGT CGTTACTTTC CCGCCTCAAG
AGTGGGCAGA TGGCCGCCTC ATCGGGTTAT CTCAGCGCGG TAAAATCCCT GCATCTGCCT
TATATCACCC TGCCCGATCA GATCAATCTC AGCAATCCGG CCATGGTCAA AGACTGGTAC
AGCAAAGTCC ACTTCACCCT GAATGTGGAC GGAAAACCCC AGACTGTGCA CACCCAGCCT
CTGGTCTTCT ATGCTGCGGT ACCCGTGGAT GCGCCCGATC CCAAACTGGG CATGGCCTTT
ATCCACTTCA TGACCAGCCC CCAGGGTCAG ACCATGTTCA AAGAGACCGG CTACAACCCA
CCCAAGGGTG ACGTACTGAA ATAA
 
Protein sequence
MKHRHYQSSL ALIVAASLLG LSPQAMAKDL HVAYAGSMGT VMDLHLGPAF AKAHSVHYQG 
EGQGAYGLAR LIAAHKLRTD VFVSITPGPI EVLIKAGLVK KAFPVASTAM CIAYSPNSPY
AKDFKEAAEG KVPWYEILKK PGVIFGRTDP KTDPQGQNIV FTFMLAERYY HQPDLVNKIL
GPVENPRQIF TEASLLSRLK SGQMAASSGY LSAVKSLHLP YITLPDQINL SNPAMVKDWY
SKVHFTLNVD GKPQTVHTQP LVFYAAVPVD APDPKLGMAF IHFMTSPQGQ TMFKETGYNP
PKGDVLK