Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1159 |
Symbol | |
ID | 6877132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1130426 |
End bp | 1131016 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642789036 |
Product | hypothetical protein |
Protein accession | YP_002219604 |
Protein GI | 198283283 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGGCT GGCTGCGTCT TCAACCTATC ACCCTGGATA TGATCATCGC CTTTCTGCGC CAGTACGGTT ACTGGATTCT CTTCATTGGC ACGCTGCTCG AGGGGGAGGC TGTCGTGATT GTTGCCGGTG CCCTGGCCCA TGCCGGAGTA CTGGATCTCC CCTTGGTGAT ATTCGTCTCC TGGCTGGGTA GCACGCTCAA CGATCAGGTG CTTTACCAGC TTGGTTACCG TTATGGCGAA CGCCTGCTGA ATATGCTGCC GCGCTTTCTG CGCCGCCACG TGGGCCAGGC CGAGGGTTTG ATCCGCCGGT TTGGTGACTG GGTGACGCTG TTCTTCCGTT TTATCTATGG TACCCGCACC ATTACCCCCA TCCTGCTAGG GGTGCATCGC TATCCAGCGC AGCGTTATCT GTGGATGAAC CCGGCCGCCG CAGCGGTGTG GGCGGCCGCC ATCGCCGGGA TCGGATACGC CCTTGGCGCC TCGCTGCGGA GTCTGCTGAA AAGCGTTCAA CATGTGCAGA TTGTGCTCCT GCTGCTGTTG ATCGCTGTAG CGTTGGCGTA CTGGTGGTGG CATCGGCGCC ATGGTGAATG A
|
Protein sequence | MLGWLRLQPI TLDMIIAFLR QYGYWILFIG TLLEGEAVVI VAGALAHAGV LDLPLVIFVS WLGSTLNDQV LYQLGYRYGE RLLNMLPRFL RRHVGQAEGL IRRFGDWVTL FFRFIYGTRT ITPILLGVHR YPAQRYLWMN PAAAAVWAAA IAGIGYALGA SLRSLLKSVQ HVQIVLLLLL IAVALAYWWW HRRHGE
|
| |