Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1150 |
Symbol | |
ID | 6877123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1120695 |
End bp | 1121951 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642789027 |
Product | DEAD/DEAH box helicase domain protein |
Protein accession | YP_002219595 |
Protein GI | 198283274 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCTT TTGAATCTCT GGGCCTTTCT GAGCCTATCT GGCGTGCGGC TGCCGAACGT GGCTACACCA GTCCCACCCC TATTCAGGAA CAGGCCATCC CGGTAGTCAT GTCCGGTGTC GATCTGCTGG CGGGTGCACA GACGGGTACC GGCAAGACTG CCGCGTTTGC CATGCCCATC CTGCACAAAC TGGCGGTTAC CGCAGGTAGT GCGTCACGCG CTCCTTCCAG TGTGCGTGCG CTGATTCTGG TCCCCACCCG CGAACTGGCG GCGCAGGTGG AGGCGAGCGT GCAGTTGTAC GGGCGCTATC TTCCCCTGCG CTCCCTGGTG CTCATCGGTG GGGTCAAGAT CAATCCCCAG ATGCAGAAAC TGCGCCGCAG CGTAGATATC CTGGTAGCCA CCCCCGGTCG CCTGCTGGAT CATATCCAGC AGCGCAGTGT CGACCTCTCT CACGTCGAAA TTCTGGTGCT CGACGAAGCC GATCGCATGC TCGACATGGG CTTTATCCGT GACATCCGGC GCATCCTTGC GGTATTGCCG AAAAAGCGCC AGAACCTGCT GTTCTCGGCG ACGTTTTCGC CGGAAATCCG TGGGCTGGCC GATGGCCTGT TGAACAACCC GACCAGTGTT GAGGTCGCGG CACGCAATGC CACTGCCGAT AATGTCGCCC AGCGGGTTTT TGCCGTCGAT CAGGACCGCA AACGCGAGCT TCTTTCCCAT CTGATCGAAG AACATCAATG GGGGCAGGTG CTGGTTTTCA CTCGTACCAA GCATGGTGCC GACCGCCTTG CCAGGCACTT ATCGCAGGAT GGCATGCAGG CGATGGCAAT CCACGGCGAT AAGAGCCAGG GCGCCCGTAC CCGCGCCCTG GCGGAGTTCA AGGAAGGCAA AGTGCAGGTC CTGGTGGCGA CGGATATCGC CGCTCGCGGT ATCGACATCA GCGAGCTGCC CCACGTGGTG AACTTTGAAC TTCCTCATGT GCCGGAAGAT TATGTCCATC GTATCGGACG GACCGGTCGC GCCGGTAACA ACGGCCAGGC CGTATCGCTG GTGAGCAGCG AGGAGCGTAA GCAGTTACAG GACGTGGAGA AGCTCCTGCG GCGCTCCTTC GACCGGGAGA TCGTCATCGG TTTCGAGCCG CGGCAGTCTT TCTCCGGTCA TGCACCGTCA GCGGCGGCGC GTCGTCCAGC TCAGGCCGCA GGGCGAGGTC GGCCCGGTTC AGGAGCGGTG CCTTCGGGTC GTGCCCGCCG CGCCTGA
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Protein sequence | MSSFESLGLS EPIWRAAAER GYTSPTPIQE QAIPVVMSGV DLLAGAQTGT GKTAAFAMPI LHKLAVTAGS ASRAPSSVRA LILVPTRELA AQVEASVQLY GRYLPLRSLV LIGGVKINPQ MQKLRRSVDI LVATPGRLLD HIQQRSVDLS HVEILVLDEA DRMLDMGFIR DIRRILAVLP KKRQNLLFSA TFSPEIRGLA DGLLNNPTSV EVAARNATAD NVAQRVFAVD QDRKRELLSH LIEEHQWGQV LVFTRTKHGA DRLARHLSQD GMQAMAIHGD KSQGARTRAL AEFKEGKVQV LVATDIAARG IDISELPHVV NFELPHVPED YVHRIGRTGR AGNNGQAVSL VSSEERKQLQ DVEKLLRRSF DREIVIGFEP RQSFSGHAPS AAARRPAQAA GRGRPGSGAV PSGRARRA
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