Gene Lferr_1143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1143 
Symbol 
ID6877116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1114513 
End bp1115727 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content61% 
IMG OID642789021 
Productglycosyl transferase group 1 
Protein accessionYP_002219589 
Protein GI198283268 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAC TGATGCTCTC CGATACCTAT TTCCCCCGCA TCAGCGGGGT CGCCACCTCG 
ATTCGCAGCT TTCGTAGGGG GCTGCAGGGA CTTGGACACA CGGTGGATCT GCTGGTCCCC
GATTATGGGT CTTCCGTGCC GAACGATGAT TCCGGCATCA TGCGTGTGCC GGCCTGGAAA
ACGGGTTTTT ATCCCGAAGA GCGATTGATG TGGCCTTGGG CACTCCTGCG CATGTCCCGT
GAGCTGGCCG CCCGTCGCTA TGACCTGCTG CATGTCCAAA CCCCCTTTGC CGCCCATTAT
ATGGGCACCC ATCTCGCCCG TAGGCTGGAG ATACCGGTCC TGAGCTCCTA CCACACCTAT
TTTGAGGCCT ACATCGGTCA CTATTATGCG GGCATACCCA AAATCCTGCG CCAAGCCCTG
GCCCGGATCC CCTCACGTCA GCAGTGCCAG GCGGTAGATG GTGTGATCGT GCCCTCCATG
GCCATGGCGA ACGTGCTCTG GGGCTACGGC GTCAATACCC CGATCCGGGT CATCCCCACC
GGCATTGATC TGACTGTGCA GACAACGGGG GATCGGTCCG CCTTTCGCGA TCGCCACGGC
ATCGCGGCAG ACCGTTTGGT ACTGCTTTAT GCCGGGCGGA TCGCTCCCGA AAAGAACATC
GCCCTGCTGC TGGAAGTGGT CGGGCACCTG CGCGCGATTT TTCCGGATAT CCTCTTGCTT
CTGGCGGGCG ACGGCCCTTT CAGGGAATCC CTGGAACAGC AGGTCGTGGA GAAGGATCTG
ACGGAGCAGG TTCGCTTTCT CGGCTATCTG GACCATGACA CGGACTTGCG GGATGCCTAT
GCCGCCGCCG ATCTTCTGGT GTTCGCCTCG GAAACCGAGA CGCAGGGCAT GGTATTGCTT
GAAGCCCTGG CGGCGGGGCT ACCTCTCGTC GCCATTGCGG CCATGGGTGC GGCGGACTTT
GTGACCAGTG GCCGCGGCAC ACGACCCGCA CCGGCCCAAG CGTCCGGTTT TGCCGAGGTC
TGTGCCGGCA TTTTATCCAA TGACATGCTG CGCGCGCGGA TGGCGCAGGA AGCCAGACAA
CTGGCCACCC AATGGACCGA ACCGGCCATG GCTGAACGTC TGCAGGCGTT TTACGCTGTT
GCCGTCGCGG GCGGCAAGTC TGCTTCGAAC CCCGCGGGTA CATCATCCGC CCCTCATCGC
ACCAGTTCCA GATGA
 
Protein sequence
MRILMLSDTY FPRISGVATS IRSFRRGLQG LGHTVDLLVP DYGSSVPNDD SGIMRVPAWK 
TGFYPEERLM WPWALLRMSR ELAARRYDLL HVQTPFAAHY MGTHLARRLE IPVLSSYHTY
FEAYIGHYYA GIPKILRQAL ARIPSRQQCQ AVDGVIVPSM AMANVLWGYG VNTPIRVIPT
GIDLTVQTTG DRSAFRDRHG IAADRLVLLY AGRIAPEKNI ALLLEVVGHL RAIFPDILLL
LAGDGPFRES LEQQVVEKDL TEQVRFLGYL DHDTDLRDAY AAADLLVFAS ETETQGMVLL
EALAAGLPLV AIAAMGAADF VTSGRGTRPA PAQASGFAEV CAGILSNDML RARMAQEARQ
LATQWTEPAM AERLQAFYAV AVAGGKSASN PAGTSSAPHR TSSR