| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1117 |
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| Symbol | |
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| ID | 6877089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 1093170 |
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| End bp | 1094645 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642788998 |
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| Product | protease Do |
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| Protein accession | YP_002219566 |
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| Protein GI | 198283245 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0590546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAATT GTGTGCTGGG TAGGCAGCGC CTTGTGATGG CGCTTTGTAT GGGTTTGGGA
CTGAGCATAG GGGCGATGAC GCCTGCTTGG GCGGATTCCG GTGCCAGCGG TCAGGCGTTG
GTGGGGCTGC CTGATTTTAC GCCCATCGTC AAGCAGTATG GACCTGCAGT AGTGAACATC
AGCACGACGG AGACCAGAGT GGCGCGTGGT GTGACTTCCC CCTTCCCGCC GAACTCTCCC
CTGAATCAGT TTTTCGCCCC CTTCTTTGGC GCACCGGGGC AACCTGGAGC ACCTGGTGGC
GGAGCCGGAC AGAAATATCA GGTGCAATCC CTGGGTTCCG GTTTTGTCAT CAGCTCCGAC
GGCTATATCG TGACTGCGGC GCATGTGGTG AAAGGGGCTC AGAAGATCAT TGTCAGTCTC
ACCAATCATC ATCAATATGC AGCTCACCTG GTGGGCCTGT CGGCGCGTAT GGATGTGGCG
TTGCTCAAAA TTGACGCGAA GAATCTGCCG GTGGTACAGA TTGGTGACTC CAGCAAGCTG
GAGGTCGGAC AGTGGGTGCT GGCGGTGGGT TCGCCCTTCG GCTTTGAGAA CAGCGTCACC
CAGGGTGTGA TCAGTGCGAC CTCGCGGCCT TTGCCGGATG ATCCCTACAT CCCGTTCGTT
CAAACGGATG TGCCGATCAA CCCTGGTAAC TCCGGTGGCC CGCTATTCAA TATGCGCGGT
CAGGTCATCG GCATCAACGA CCAGATCTAT ACCAATAGCG GTGGCTACAT GGGGTTGTCT
TTCTCTATCC CCATCAATGT CGCCATGGAT GCGGTCAAAC AGTTAAAGCT GCATCAGAAA
GTGCATTTTG GCTGGCTCGG GGTCATGATT CAGGATGTCA GCATGGATCT CGCCAAGTCC
TTCCACATGA AAGAGCCGGT GGGTGCCTTG GTGTCACAGG TTGTGCCTGA CGGTCCGGCT
GCCAAGGCGG GGTTACGTCC GGGAGATGTC ATTGTCTCCT TTGACGGTCA GGCCATCTAT
AACTCTGGTC AATTACCGCC GCTGGTGGGA GTATTGCCCG CCGGTTTCAA GGCGAAGCTG
GGGGTTATCC GTGATGGCAA GCCCATGAGC CTCAACATCG TGGTGGAGAG TCTGCCCGGC
AACCTGGAGA ATACGGTGGA ATCCGCCGCA TCCGGCGGTC CGGCGCAGGA AGGTGAAGTC
AAACGACTGA ATGTGCAGGT GGGTCCGCTG ACTGCGGAGG CACGTAAGCA ACTGCACGTG
AATACTGGTG TCCTGGTCCT CGGGGTTGGT GTGGGGCCGG CGGCAGAAGC CGGTATTCGT
CCCGGTGATG TGATCTTGCA GGTGGCACAG CAGCAGATTA CCAATGCCGC CGACTTGCAG
AAGCTGGTGG CTGCCTTGCC GGCGGGCCAG CCGATCCCGG TGCTGGTGCG ACGTGGTGAG
GGGAGTTTCT ATCTGGTGCT TTCGCTGCCG CATTGA
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| Protein sequence | MKNCVLGRQR LVMALCMGLG LSIGAMTPAW ADSGASGQAL VGLPDFTPIV KQYGPAVVNI
STTETRVARG VTSPFPPNSP LNQFFAPFFG APGQPGAPGG GAGQKYQVQS LGSGFVISSD
GYIVTAAHVV KGAQKIIVSL TNHHQYAAHL VGLSARMDVA LLKIDAKNLP VVQIGDSSKL
EVGQWVLAVG SPFGFENSVT QGVISATSRP LPDDPYIPFV QTDVPINPGN SGGPLFNMRG
QVIGINDQIY TNSGGYMGLS FSIPINVAMD AVKQLKLHQK VHFGWLGVMI QDVSMDLAKS
FHMKEPVGAL VSQVVPDGPA AKAGLRPGDV IVSFDGQAIY NSGQLPPLVG VLPAGFKAKL
GVIRDGKPMS LNIVVESLPG NLENTVESAA SGGPAQEGEV KRLNVQVGPL TAEARKQLHV
NTGVLVLGVG VGPAAEAGIR PGDVILQVAQ QQITNAADLQ KLVAALPAGQ PIPVLVRRGE
GSFYLVLSLP H
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