Gene Lferr_1099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1099 
Symbol 
ID6877070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1076357 
End bp1076959 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content54% 
IMG OID642788979 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_002219548 
Protein GI198283227 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.377467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAT TAGTAGGAAA AGCTGCCCCC GATTTTGTAG CCCCCGCAGT CATGCCAGAT 
AACAGCATCA ACGAAAAGTT TCAGTTTTCT CAGCATATTA AGGGAAAGTA TGCGGTTCTG
TTCTTTTATC CCCTCGATTT TACCTTTGTC TGCCCCTCGG AAATTCTGGC GTTCAATCAT
CGCCTGAACG AGTTCAAGTC CCGCAATACC GAGGTCATCG CTTGCAGCGT GGACTCCCAT
TTCACCCATC TGGCCTGGAA GAACACGCCG GAAGAGAAGG GCGGTATCGG CCATATCCAG
TTGCCCATGG TCGCCGACCT CTCCAAGAGC ATCGCCCGCA ATTACGATGT CCTGCTCAAC
GATGAGGTTG CCCTGCGCGG TTCCTTTTTG ATCGACCGTG AAGGCATCGT GCGTCACGAG
GTGGTCAATG ACCTGCCCCT GGGCCGCAAC ATCGACGAAA TGATCCGGAT GGTGGACGCA
CTGCAATTCT CGGAAGAACA CGGCGAAGTT TGTCCTGCCC AGTGGCAGAA GGGTAAAGCA
GGCATGAAGC CGACCAGCGA AGGTGTCGCC GACTTCCTGG CGCATCACGG CAAAGAGCTC
TGA
 
Protein sequence
MAVLVGKAAP DFVAPAVMPD NSINEKFQFS QHIKGKYAVL FFYPLDFTFV CPSEILAFNH 
RLNEFKSRNT EVIACSVDSH FTHLAWKNTP EEKGGIGHIQ LPMVADLSKS IARNYDVLLN
DEVALRGSFL IDREGIVRHE VVNDLPLGRN IDEMIRMVDA LQFSEEHGEV CPAQWQKGKA
GMKPTSEGVA DFLAHHGKEL