| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1078 |
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| Symbol | |
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| ID | 6877049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1055877 |
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| End bp | 1056893 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642788958 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_002219527 |
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| Protein GI | 198283206 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTTC ACAAAATTTG TATTCTGGGG GGCACGGGCT TCGTGGGGCG GCACCTGGCA
GAGCGGTTGA GCCAGAAAGG ACACGCCGTG CGCATCCTGA CGCGCAACCG CGAACGTCAC
CGTGAAAATC TGCTGGTACT CCCCGGTGTG GAGTTGATCG AGGCCAATGT CCATGACCCC
GTCGCGTTAA AAAAACAGCT TGCAGGACGA GATGTCGTCA TCAATCTCGT GGGAATCCTC
AATGAACGCC ATCAAGGCGA TTTCGACAGG AACCACGTCG AACTCCCGCG CCTGGTAGTC
GGCGCCTGCA ATGATCTGGG CATCCCCCGT CTACTTCACA TGAGCGCATT GGGAGCCAGC
CCCACCGGTC CCAGCGCCTA CCTGCGCTCC AAGGGGACGG GTGAGGAGAT CGTCCGTCAG
TCGAACGGGA ATAGGGCGGA AATGGGACGC TTTGATGATC TGGAAGAACC CATGCCACTC
TGGAGCCATG GGCTCAAAAC CACTTCTTTT CGCCCAGCGG TGATTTTTGG TGAGGGTGAC
AGCTTTTTCA ACCGCTTCGC CGGGCTATTG CGCCGCATTC CCTTTTTCAT TCCGCTGGCC
CGGTCGAAAG CCAGAATGCA GCCGGTCTGG ATTGAAGATG TGGTCAGCGC CTACGTGCAA
TCCATGGATG ACGAAAAAAC CTACGGTCAA GCCTATGATC TGTGTGGTCC GAAAGTCTAT
ACCCTCGGTG AACTGGTGGC CTATACCCAG AGTCTGATCG GCACCCGTCG CGTCATCGTG
CCCCTCGGTG ACTTCGCCGG CAATCTTCAG GCCAGCATCA TGGAAAGGCT GCCGGGCAAG
GTACTCACCC GCGATAACCT GCTCTCCCTG TCTATCGACA GCGTCTGTAC CAGAAATGAT
CTGGCCGAGA GTTTTCAGAT AGAGGCCACC TCTGTCGAGA GTATCGTACC CGGCTACCTG
GGCGGGAAAG GTGCCCGCGC GGAGCGTCTG GCGGAAATCC GCAACCGGCG TTCCTGA
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| Protein sequence | MTLHKICILG GTGFVGRHLA ERLSQKGHAV RILTRNRERH RENLLVLPGV ELIEANVHDP
VALKKQLAGR DVVINLVGIL NERHQGDFDR NHVELPRLVV GACNDLGIPR LLHMSALGAS
PTGPSAYLRS KGTGEEIVRQ SNGNRAEMGR FDDLEEPMPL WSHGLKTTSF RPAVIFGEGD
SFFNRFAGLL RRIPFFIPLA RSKARMQPVW IEDVVSAYVQ SMDDEKTYGQ AYDLCGPKVY
TLGELVAYTQ SLIGTRRVIV PLGDFAGNLQ ASIMERLPGK VLTRDNLLSL SIDSVCTRND
LAESFQIEAT SVESIVPGYL GGKGARAERL AEIRNRRS
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