| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1070 |
|---|
| Symbol | |
|---|
| ID | 6877041 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011206 |
|---|
| Strand | - |
|---|
| Start bp | 1045231 |
|---|
| End bp | 1046865 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642788950 |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_002219519 |
|---|
| Protein GI | 198283198 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGT TGATCAATCC CACGGTGGTG GAGCTATCGC GCCTACAGTT CGCGCTGACC
GCTCTCTACC ACTTCTTATT TGTACCACTC ACCCTGGGTA TGACCTTTAT TCTGGCCACC
ATGGAAACGG TGTATGTCAT CACCGGCAAA CAGATATATA AAGAAATGAC TCAGTTCTGG
GGCAAGCTCT TCGGCATCAA CTTTGCCCTG GGTGTCGCTA CCGGCCTGAC CATGGAGTTT
GAATTCGGGA CCAACTGGTC CATGTACTCC CACTTCGTGG GCGATATTTT CGGTACCCCG
CTGGCCATTG AGGGGCTGAT GGCCTTCTTC ATGGAATCCA CCTTTGTCGG TGTGATGTTC
TTCGGCTGGG ACCGCATGAG CCGCAAGGCG CACCTCGTGG TCACCTATCT GGTTGCTCTC
GGTTCCAACC TTTCTGCATT GTGGATTCTC ATTGCCAACG GCTTCATGCA GGACCCGCGG
GGCGGCACTT TTGATCCCAA TACCATGCGG ATGCAATTTT CCAGCTTTAT CGACCTGATC
TTCAATCCGG ATGCGCAGGC CAAGTTTGTG CATACCTCCA TCGCGGGTTT CGTAACCGGC
TCCATGTTTG TCATGGGCGT CAGCGCTTAT TACATGCTGA CCAACAAGCG GAAAGATATG
GCGTTGCGTT CCTTCCGGAT CGCCACGCTC TTCGGCGTGA TTTCCAGCAT CGGCGTCATT
ACCCTGGGTG ACGCCCTGGG CTACATTGAT GGTCAGAAAC AACCCACCAA GCTGGCGGCC
ATGGAAGCCA TCTGGAACAC GGATTACAAC ACGGTGTCCG CGTCCTGGAA CCTCATCGCC
ATCCCCAGCC GTAGCGAACA GAAGAATCTC TTCGAGGTTT CCATCCCGTA TATCCTTACA
CCGCTGCTGA CCCACTCCGA AACGACGGTC ATTCCCGGCA TCATCCAGCT GGAGCAGGAA
GCCAAGCCAA AGATTGCCAA TGGCATCAAG GCGATGATCG CGCTGAAGGA GTACAACCTG
GATCATAGCA ATACCCAGGC ACTGGCCACC TTCAAGCAGT ATGAAAATGA CATGGGTTAC
GGTTTCCTGG CCATGCAGTT TGCGCCTGAT CAGGACCTCA AGAAGATCGA CGCCACCAAT
CTGCCCAGCA TTCTGGACAA GACCGCGAAG GACACCATCC CCAATGTCTG GGTAGAGTTC
TGGGCCTTCC GCCTGATGGT CGCCATGGGC TTCTTCATGC TGGTCCTCTT CGCTTTCGCG
GCTTATTTCA GCCTGAAGAA CGAAATCGAG AAACACCCCA CCCTGCTGAA ACTGGCGATG
TGGAGTATTC CCTTGCCTTG GGTAGCCTGT GAGTTCGGTT GGATCACCGC CGAAAATGGT
CGTCAGCCGT GGACGGTATT CGGCTGGCTG CCCACCTTCG TCTCCGCCTC CACCCACAGC
GTCGGCTACA TGGTGTTCTC GCTTATCGGG TTCACCCTGC TGTACAGCTC TTTCATCGCG
GCGGAGCTCT ACCTGATGTT CAAATATGCC CGTCTGGGTC CGCAGGATGA CCATCATGGT
CACGGTTCTG CACCTGCGGG TGGCGGCATG GCGGGTCAGC CGGTGTTTGC CAAACCCAGC
ATGGATCGCA AGTAA
|
|---|
| Protein sequence | MDMLINPTVV ELSRLQFALT ALYHFLFVPL TLGMTFILAT METVYVITGK QIYKEMTQFW
GKLFGINFAL GVATGLTMEF EFGTNWSMYS HFVGDIFGTP LAIEGLMAFF MESTFVGVMF
FGWDRMSRKA HLVVTYLVAL GSNLSALWIL IANGFMQDPR GGTFDPNTMR MQFSSFIDLI
FNPDAQAKFV HTSIAGFVTG SMFVMGVSAY YMLTNKRKDM ALRSFRIATL FGVISSIGVI
TLGDALGYID GQKQPTKLAA MEAIWNTDYN TVSASWNLIA IPSRSEQKNL FEVSIPYILT
PLLTHSETTV IPGIIQLEQE AKPKIANGIK AMIALKEYNL DHSNTQALAT FKQYENDMGY
GFLAMQFAPD QDLKKIDATN LPSILDKTAK DTIPNVWVEF WAFRLMVAMG FFMLVLFAFA
AYFSLKNEIE KHPTLLKLAM WSIPLPWVAC EFGWITAENG RQPWTVFGWL PTFVSASTHS
VGYMVFSLIG FTLLYSSFIA AELYLMFKYA RLGPQDDHHG HGSAPAGGGM AGQPVFAKPS
MDRK
|
|---|
| |