| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1055 |
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| Symbol | |
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| ID | 6877026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | - |
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| Start bp | 1025172 |
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| End bp | 1026470 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642788935 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_002219504 |
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| Protein GI | 198283183 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3259] Coenzyme F420-reducing hydrogenase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.620596 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA GCCGTGAGAT CAGCCTTTGC GTGCCGGTCC TGGCGCGGGT GGAGGGGGAA
GGCGCCCTGG ATCTGGAAGT GCATGACGGG CGCATTCAAA CCCTGCGCCT GCGCATTTTC
GAGCCGCCTC GACTCTTCGA GAAGTTCCTG GAAGGCCGGG AATACCAGGA GATCCCGGAC
ATGGTGGCAC GCATCTGCGG CATCTGCCCG GTGGCCTATC AGATGAGCGC CGTGCATGCC
ATCGAGGGTA TCTTCGGCCA GGCACCCGGT CCCTGGGTGC GGGCCATGCG CCGCGTGTTC
TACTGCGGCG AGTGGATACA GAGCCACAGC CTGCACATCC ATCTGCTGGC AGCGCCCGAT
TTCCTGGGTT ACAGCAGCGC CTCCGAGATG GCGCGCGCGC ATCCCGACAT CGTGCGCCGG
GGGCTCGCCC TCCAGGCATT GGGCAATGAG ATCATCCGCT TTTTCGGCGG TCGCTCGGTG
CATCCCGTGG GTGCCCGGGT GGGGGGCTTT CACCGTGCGC CCAGCCGGGC GGAGGCGGCG
GTACTCCGGG AGCAGGTGCG GGCTGCCCTG CCGGGGGCCG AAGCCCTGGT GGCCTGGACC
GCCGCGCTGA ACCTGCCCGA CGACCCTCAG GACTTTGTCA GTGTCGCCCT GCGCCACCCG
GATGAGTACC CCATGAACGA GGGGCGCATC GTCTCCAGTG ACGGCCTGGA CATTCCCATC
GCCGACTACG AAAGCCATTT CCGGGAGCAT CAGGAACCCC ACTCCACCGC CCTCTATGCG
GCGCTGGACG GACGCCCCTA CCTGGTGGGT CCCCTTGCGC GGCTCAACCT CAATCTGGAT
CGCCTGCATA TGCCCGTCCG GGAGGCCCTG GGGCGTACCG GCATCGCTTT TCCCAGCCGC
AACATGTTCC ACAGCATTGT CGCGCGGGCG GCAGAGATCC ATTATGCCCT TCTGGAGACC
AGCCGCCTGC TGGAAGATTA CACCGAGCCA GAGGCACCCT TCGTCCCCGC CGTACCGCGC
GTCGGCATCG GTTACGGGTG CACGGAGGCC CCCCGCGGCC TACTCTGGCA CCGCTACGAT
CTGGATGCCG CAGGTCAGGT GCTGCACGCC CGCATCGTCC CGCCCACCAG CCAGAATCAG
GCGCGTATGG AGGCGGACCT GCGTCACTCC CTGGAGACCC TGGGTCTGGA CCGGGACGGC
GAGACCCTGC GCCAGCAAGC CGAAATGGTG ATCCGCAACT ACGATCCCTG CATCTCTTGC
GCCACCCATT TCCTGAAGGT TCGGCTGGAA CGGCGGTGA
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| Protein sequence | MTQSREISLC VPVLARVEGE GALDLEVHDG RIQTLRLRIF EPPRLFEKFL EGREYQEIPD
MVARICGICP VAYQMSAVHA IEGIFGQAPG PWVRAMRRVF YCGEWIQSHS LHIHLLAAPD
FLGYSSASEM ARAHPDIVRR GLALQALGNE IIRFFGGRSV HPVGARVGGF HRAPSRAEAA
VLREQVRAAL PGAEALVAWT AALNLPDDPQ DFVSVALRHP DEYPMNEGRI VSSDGLDIPI
ADYESHFREH QEPHSTALYA ALDGRPYLVG PLARLNLNLD RLHMPVREAL GRTGIAFPSR
NMFHSIVARA AEIHYALLET SRLLEDYTEP EAPFVPAVPR VGIGYGCTEA PRGLLWHRYD
LDAAGQVLHA RIVPPTSQNQ ARMEADLRHS LETLGLDRDG ETLRQQAEMV IRNYDPCISC
ATHFLKVRLE RR
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