Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1052 |
Symbol | |
ID | 6877023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 1021425 |
End bp | 1024058 |
Gene Length | 2634 bp |
Protein Length | 877 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642788932 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_002219501 |
Protein GI | 198283180 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.103695 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGC AAGCCATTCG CCAAGCTTTT CTGGAGTATT TTGTGGAACA GGGGCATCAG ATCGTGCCCT CCAGCCCCCT GATCCCTCGT AACGATCCGA CCCTGCTGTT TACCAATGCC GGTATGGTGC CCTTCAAGGA CGTGTTTCTT GGCCTGGAAA CCCGTCCCTA CCGGCGCGCC GTTTCCTCGC AGCGTTGCAT GCGCGCGGGT GGCAAACACA ACGATCTGGA AAATGTCGGC TACACAGCGC GGCACCATAC CTTCTTCGAG ATGCTGGGCA ACTTCTCTTT TGGCGACTAT TTCAAGCGTG AAGTGATCGG CTTTGCCTGG CGTTTCCTCA CCGAACGTCT GGGCCTGCCG CCGGAAAAGC TCTGGATTAC GGTTTACGAG GAGGATGATG AGGCGGCCGA CATCTGGATG AACGAGATCG GTATCGATCC CGCGCGCCTC TCCCGCTGCG GCGAAAAGGA CAACTTCTGG AGCATGGGCG ACACCGGCCC CTGCGGCCCC TGTTCGGAGA TTTTCTATGA CCACGGCCCC CATATTCCCG GAGGCCCTCC GGGCAGTCCG GAGGAAGACG GCGATCGCTA TATCGAAATC TGGAATCTGG TCTTCATGCA GTTTGACCGG GACAGCAGCG GCACCCTGAC CCCTCTGCCA AAACCCTCCG TCGATACCGG CATGGGTCTG GAGCGTCTCG CGGCCGTGCT CCAGGGCGTA CATAACAACT ATGACACCGA TCTCTTCAAG CCGCTGATTG CCGCAGCAGC CACCATCAGC GGCAAAACAT ATGGGAGCGA TGCGGCGACG GACATCAGTT TGCGGGTGCT GGCGGATCAC ATCCGTGCCT GCAGCTTTCT CATCACCGAT GGCGTCCTGC CCGCCAACGA AGGCCGCGGC TATGTGCTGC GCCGCATCAT CCGCCGCGCC GTGCGTCATG GCCGCAAGCT GGGCATGGAG ACGGTATTTT TCCATCAACT GGTGGCGCCG CTGGTGGCGG AGATGGGCAG TGCCTTTCCC GAACTCACGC GGGCACAGCG CGAAGTGGAG CGCGCTCTGG AGCGTGAGGA AACCCGTTTC CGGGAAACGC TGGAGCGCGG ACTCAGTCTG CTGGAGGAGG CCATTGCGGA TCTTGCAGCG GGTGCCGCCA TTCCCGGCGA GATCATTTTC CGGCTCGCAG ATACCTTTGG TTTCCCCGTC GATCTAACCG CTGATATCGC CCGCGAGCGC GATCTGATCA TGGATATGGA GGGCTACGAG GCGGCTATGG CGGAGCAGCG CAGCCGCTCC CGTGCCGCCT GGGCGGGCAG CGGTGAGGTC AAGACCGAGC GGGTGTACCA CGATCTGGCC ATGCGGCTGC CGGTTACCGA GTTCACCGGC TATTCGACCT GTGCCGATGA GGGGAAGGTG GTGGCGCTGA TCCGCGATGG TGAAGAGGTG GCCTTCCTCG AAGCGGGGGA CATGGGAGTG GTTATTCTCG ATCGGACGCC CTTTTACGGG GAGTCCGGCG GGCAGGCGGG AGACCGTGGC GAGCTCCAGT CGGATGATGC CCTGTTTGCC GTGACGGACA CCCAAAAGCC CATGGGTCAC CTGCATGTGC ATTTGGGGCG CATGGAATCC GGGCGCCTGC GGGTCGGCGA TATGGTGGTT GCCAGCATCG ACGAAGTGGC CAGACGGGCG ACGGCCGCAC ATCACTCCGC GACCCACCTG CTCCATGCCG CCTTGCGCAA CATTCTCGGC AGTCATGTGC AGCAGAAGGG TTCGCTGGTC AACCCGGAGC GGCTGCGTTT CGACTTCAGT CAGCCGGAGC CGGTGACGGC CGCACAGTTG CGGGAAATCG AGCGCGTGGT CAACGCCGCT ATCCGTAATA ATGTCGGCGC CGAAACCCGG ATCCTGCCTG TCGCCGAGGC ACAGGCCCTG GGTGCCATGG CGCTCTTCGG CGAGAAGTAC GGAGACGAGG TGCGGGTGGT GCGCATGGGT GACTTCTCCA TGGAACTCTG TGGCGGCACC CATGTGGAGG CGCTGGGCGA TATAGGTGTT TTCAAGATCC TCAGCGAAAG CGGCGTGGCA GCGGGTATCC GGCGTATCGA AGCAGTCACC GGCGCGGTGG CGCTGGAGGC TATTCAGCGT GATGAAGAAC GCCTGCAAGC GGCGGCCGGA CTGTTGAAAG TTGCCCCTGC AGAACTGGAC CAACGTCTGG CGCAAACCCT GGAACGCCTG CGCCAGTTAG AAAAAGAGCT GGAAAAGGTC AAGCGGGATG AAGCCGCCAG AGCGGGTGCC GATCTTGCCG CAGAGGCCGA GGATGTGGGC GGAGTACCGG TATTGATCAG GCGCCTGGAG GGGATGGATG GCAAAGCCTT GCGCGATGCC CTGGATCGCC TGCGCAGTCA GTTACCTGAC GGCGTCATCG TCCTTGCGGG CGTGGAAAGG GAGAAAGTGG CGTTGATTGC CGGAGTCGGT AAAGGATTGA CTGGACGGGT TCACGCCGGA GAACTGGTGA ACACCGTGGC ACAACCGTTG GGCGGCAAGG GGGGTGGGCG TCCGGAACTG GCGCAGGCCG GGGCCGGCAA TCCGGCGGCC TTGGATGCCG CCCTCGCCGC CGCCCGCGAC TGGGTCAAAG GCAAACTCGG CTAG
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Protein sequence | MQAQAIRQAF LEYFVEQGHQ IVPSSPLIPR NDPTLLFTNA GMVPFKDVFL GLETRPYRRA VSSQRCMRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKREVIGFAW RFLTERLGLP PEKLWITVYE EDDEAADIWM NEIGIDPARL SRCGEKDNFW SMGDTGPCGP CSEIFYDHGP HIPGGPPGSP EEDGDRYIEI WNLVFMQFDR DSSGTLTPLP KPSVDTGMGL ERLAAVLQGV HNNYDTDLFK PLIAAAATIS GKTYGSDAAT DISLRVLADH IRACSFLITD GVLPANEGRG YVLRRIIRRA VRHGRKLGME TVFFHQLVAP LVAEMGSAFP ELTRAQREVE RALEREETRF RETLERGLSL LEEAIADLAA GAAIPGEIIF RLADTFGFPV DLTADIARER DLIMDMEGYE AAMAEQRSRS RAAWAGSGEV KTERVYHDLA MRLPVTEFTG YSTCADEGKV VALIRDGEEV AFLEAGDMGV VILDRTPFYG ESGGQAGDRG ELQSDDALFA VTDTQKPMGH LHVHLGRMES GRLRVGDMVV ASIDEVARRA TAAHHSATHL LHAALRNILG SHVQQKGSLV NPERLRFDFS QPEPVTAAQL REIERVVNAA IRNNVGAETR ILPVAEAQAL GAMALFGEKY GDEVRVVRMG DFSMELCGGT HVEALGDIGV FKILSESGVA AGIRRIEAVT GAVALEAIQR DEERLQAAAG LLKVAPAELD QRLAQTLERL RQLEKELEKV KRDEAARAGA DLAAEAEDVG GVPVLIRRLE GMDGKALRDA LDRLRSQLPD GVIVLAGVER EKVALIAGVG KGLTGRVHAG ELVNTVAQPL GGKGGGRPEL AQAGAGNPAA LDAALAAARD WVKGKLG
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