Gene Lferr_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_1035 
Symbol 
ID6877004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp1004829 
End bp1005101 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content54% 
IMG OID642788913 
Producthistone family protein DNA-binding protein 
Protein accessionYP_002219484 
Protein GI198283163 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.57803e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.62139e-09 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAT CGGAGTTGAT CGAGAAGATT GCAGAAGAAG CTGGCGTGAC CCGTGCCGCC 
GCCGGCCATA CTCTGGATGC GCTTGTCAAG GTGGTTACTG ACGCGCTCAA GGCTGGTGAT
CAGGTAACTC TGGTCGGTTT CGGTTCATTT CTTGTTTCCA GCCGTGAGGC GCGCAAAGGC
CGTAATCCCG CTACCGGCGC GGAAATCATG ATCGCCGCAA GTCGCACGCC TAAATTTAAG
GCTGGTAAAG CGTTGCGTGA TGCAGTAAAC TAG
 
Protein sequence
MNKSELIEKI AEEAGVTRAA AGHTLDALVK VVTDALKAGD QVTLVGFGSF LVSSREARKG 
RNPATGAEIM IAASRTPKFK AGKALRDAVN