| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1023 |
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| Symbol | |
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| ID | 6876992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 991956 |
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| End bp | 993257 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788901 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_002219472 |
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| Protein GI | 198283151 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00127553 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000467084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACTCGAT ATCTCGTTCG TCCAGGCAGT CGGCTTGCCG GCCGTTTCCC GGTCCCGGGA
GACAAATCCA TTTCCCACCG TGCGGTCATT CTCGGGGCGC TTGCTGAAGG TGTCACTGAA
GTGGAGGGGT TGCTGGAGGG CGCCGATGTG CTGGCCACCA TCGCCGCTTT TCGCAGCATG
GGGGTGCAGA TGGAAGGCCC CGATAAAGGG CATCTGCGCA TTCATGGGGC TGGCCTGCAG
GGGCTGCGCG CGCCCGTTGT TCCTCTGGAT TGCGGGAATT CCGGTACCGC CATGCGTCTC
TTGGCGGGAG TGCTGGCCGG ACAGCCTTTC CCCAGCACCC TGGTTGGCGA CGCCAGTTTG
CAGAAGCGGC CCATGGGCCG CATTCTGAAC CCGTTGCGTG CCATGGGCGC GGAAATCGCC
GCCCAGGATG GCAGGGCACC TTTACATATT CATGGGCGGC CCCTGCACGG CATCGACTAT
GCCCTGCCGG TGGCGAGCGC CCAGGTCAAA TCCGCCGTGT TGTTGGCCGG ACTGTATGCC
GACGGACAAA CCTGCGTGAC CGAGCCCGCA CCCACCCGCG ATCACAGCGA GCGGATGCTG
CAAGGTTTTG GCCAACCGGT GGAGCGTCAT GGCCCGCGCG CCTGCCTGCG CGGCGGTGGC
CGGTTGTGCG GGCAGGCGCT GCAGGTGCCG GGCGATATTT CGTCGGCCGC GTTCTTCCTG
CTCGGCGCCA CCATCGCGCC GGGCTCCGAT CTCACCCTGG AAGGAGTTGG TATCAATCCG
ACCCGGACCG GTATCATCGA AATCCTCACC CGCATGGGCG CCCGGATCGA TCTGACGGCC
TTGCGTGAAG TGGGCGGTGA GCCAGTCGCT GATATCCGCG TTCGCTATGC ACCATTGCAA
GGTATCGCTA TCCCACCTCG GCTGGTACCT CTGGCTATCG ATGAATTCCC CGCGCTGTTC
ATAGCGGCGG CGTGTGCGAA GGGGCAGACG GTGATTACCG GTGCCGAGGA ACTCCGTGTC
AAGGAAAGCG ACCGCATCGC GGTAATGGCT GGAGGGCTGC GCGCGCTGGG TGCTACGGTA
GAAGAGCGTG TGGATGGCGC CATTATCAGC GGATCAGCGC TGCTGGGCGG CCGGGTGGAC
AGTCATGGGG ATCATCGTAT TGCGATGGCT TTTGCCATGG CCGCACTGGT GGCGCAGGGG
GATATGGAAA TCCTGGACTG TGCCAATGTG GCGACGTCCT TTCCGAGTTT TCCCGCGCTG
GCGCAGCAGG CGGGGCTGCT GCTGGAGGTG GCAAGCGCAT GA
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| Protein sequence | MTRYLVRPGS RLAGRFPVPG DKSISHRAVI LGALAEGVTE VEGLLEGADV LATIAAFRSM
GVQMEGPDKG HLRIHGAGLQ GLRAPVVPLD CGNSGTAMRL LAGVLAGQPF PSTLVGDASL
QKRPMGRILN PLRAMGAEIA AQDGRAPLHI HGRPLHGIDY ALPVASAQVK SAVLLAGLYA
DGQTCVTEPA PTRDHSERML QGFGQPVERH GPRACLRGGG RLCGQALQVP GDISSAAFFL
LGATIAPGSD LTLEGVGINP TRTGIIEILT RMGARIDLTA LREVGGEPVA DIRVRYAPLQ
GIAIPPRLVP LAIDEFPALF IAAACAKGQT VITGAEELRV KESDRIAVMA GGLRALGATV
EERVDGAIIS GSALLGGRVD SHGDHRIAMA FAMAALVAQG DMEILDCANV ATSFPSFPAL
AQQAGLLLEV ASA
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