| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_1018 |
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| Symbol | |
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| ID | 6876987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 986299 |
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| End bp | 987882 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642788896 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_002219467 |
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| Protein GI | 198283146 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000612711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAGCCG TTTTGATCGC CGATAAAATG TCAGCACGTG CGGTAGAAAT ATTTCACGAA
CGTGGTATCG CCGTGGAGGT GAAAACCGGT CTGGGCAAAG AGGCACTTTG CGCGATCATC
GGTCAGTACG ACGGTTTGGC GATACGCTCG GCGACCAACG TGGATGCCGA CGTGCTCGCC
GCTGCCAGTC GCCTGAAGGT GGTGGGGCGG GCTGGTATTG GCGTGGACAA TGTCGATATC
CATGCGGCCA GCAAACGCGG CGTGATCGTC ATGAATACCC CCTATGGCAA CACGGTGACG
ACCGCGGAGC ATGCCATCGC CTTGATGATG GCGGCGGCAC GGATGATCCC CCAGGCCACC
ATGAGCCTGA AGGCGGGGCA GTGGGAAAAA TCCCGTTTCC AGGGGGTCGA ACTCTACCAG
AAGACCCTGG GCGTCATCGG CACGGGCAAT ATCGGTTCGC TGGTGATTGC CCGTGCCCAA
GGTCTGGGGA TGCGGGTCAT CGCCTACGAT CCCTATCTCT CCAAAATCCG TGCGGCCGAT
CTCGGCGTGG AACTGGTGGA GATGGATACG CTGCTGGCCC GCGCCGATTT TTTAACGGTC
CATACGCCGC TGACGGATGC TACCCGTAAC CTTTTCCGTG CCGAGACCTT CGCCAAAATG
AAGCCGGGTG CCATTCTGGT GAATGCCGCA CGTGGCTGCA TCGTGGATGA GGCAGCCCTG
TACGATGCCT TGAAATCCGG GCACTTGCGC GCTGCGGCTC TGGATGTTTT CTGCAAGGAA
CCGGTGCATG GCGACAATCC CTTGCTGGAA CTGGACAACT TCATCTGTAC GCCGCACCTC
GGGGCTTCCA CCGAAGAGGC ACAGGTCAAT GTCGCTATCC AGGTGGCCGA GCAGATCAGC
GCCTATCTGT TGCGCGGCGT GGTCCAGAAT GCGGTCAATC TGCCTTCCGT CAAAGAGGAG
GAATTGCTGC TGTTGCAGCC CTACCTCAAT CTCGGAGAGC GGCTCGGACT GGTTCTGGGG
CAACTGGCAG GTTCCGGGCT GCGCGAAGTG GTGATCGAAT ATGCCGGCGA AGTTGCCGAA
CTCAATACGG CGGCCCTCAC CACCGCCATT CTCAAGGGCA TTCTGCAGAG TGCCCTGCCG
GAAACCATCA ATGCCGTCAA CGCCCCGGTT CTCGCCAAGG AGCGCGGCAT AGGCATCGAA
ACCCGCAAAC GCGAATCAGC CGACGAACTG CGCGCCCGGA TCGCGGTGAC GCTGCGCATG
GATCAGGGTG AGCGGGTGGC GGTGGGAACC CTGGTTCATG AGCATCAGGC CCGTCTGGTT
CAACTGGATG GTATCGACGT GGAAATGCCT CTGGCGGGGG ATCTGCTCTA TATCCAGAAT
CGTGACGAGC CCGGTCTGAT CGGGCGCATC GGTGGGTTGC TGGGCGCAGC GGGCATCAAT
ATTGCGCAAT TTCACCTGGG CCGCGAAAAA CCGGCGGGGG CAGCACTCTC CTTCATTGCC
GTCGACCAAC CGCTGACGGA AGTGTTGCTG GAGCAGGTTG CCTCCCTTCC GGGAGTCTTG
GCGGCCCGCA TGTTGCGGTT ATGA
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| Protein sequence | MPAVLIADKM SARAVEIFHE RGIAVEVKTG LGKEALCAII GQYDGLAIRS ATNVDADVLA
AASRLKVVGR AGIGVDNVDI HAASKRGVIV MNTPYGNTVT TAEHAIALMM AAARMIPQAT
MSLKAGQWEK SRFQGVELYQ KTLGVIGTGN IGSLVIARAQ GLGMRVIAYD PYLSKIRAAD
LGVELVEMDT LLARADFLTV HTPLTDATRN LFRAETFAKM KPGAILVNAA RGCIVDEAAL
YDALKSGHLR AAALDVFCKE PVHGDNPLLE LDNFICTPHL GASTEEAQVN VAIQVAEQIS
AYLLRGVVQN AVNLPSVKEE ELLLLQPYLN LGERLGLVLG QLAGSGLREV VIEYAGEVAE
LNTAALTTAI LKGILQSALP ETINAVNAPV LAKERGIGIE TRKRESADEL RARIAVTLRM
DQGERVAVGT LVHEHQARLV QLDGIDVEMP LAGDLLYIQN RDEPGLIGRI GGLLGAAGIN
IAQFHLGREK PAGAALSFIA VDQPLTEVLL EQVASLPGVL AARMLRL
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