Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lferr_1016 |
Symbol | |
ID | 6876985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
Kingdom | Bacteria |
Replicon accession | NC_011206 |
Strand | + |
Start bp | 982654 |
End bp | 985191 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642788894 |
Product | DNA gyrase, A subunit |
Protein accession | YP_002219465 |
Protein GI | 198283144 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000944183 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATCGAAT TCGCCAAAGA AACCATTCCT GTCAGTCTCG AAAAGGAGAT GCGCCAGTCC TACCTCGATT ACGCCATGAG CGTGATCGTC GGTCGTGCCC TGCCGGACGC CCGCGACGGC CTCAAGCCAG TGCATCGTCG TGTGCTCTTC GCCATGCACG AGATGAGCAA CGATTGGAAC AAACCCTACA AGAAGTCGGC GCGTGTCGTC GGCGATGTCA TCGGTAAATA CCATCCCCAC GGCGATACCG CTGTCTATGA CACGATGGTG CGGATGGCGC AGGACTTTTC CATGCGCTAC CCGCTCATCG ACGGGCAGGG TAACTTTGGT TCGGTGGATG GCGACAGCCC CGCCGCCATG CGCTACACCG AAGTGCGTAT GTCCCGCATT GCCCACGAGA TGCTGGCGGA TCTGGAAAAG GAGACCGTTG ATTTCGGCCC CAACTACGAT GAAAAGGAGA TGGAACCGCT GGTCATGCCA GCGCGTATCC CCAATCTGCT GATCAATGGC TCGGCGGGCA TCGCGGTCGG TATGGCCACC AATATCCCGC CCCACAATCT GACGGAAGTG ATCAGTGCCT GTCTGGCGCT GGTGGATGAT CCCGAGACTC CGGATGAAGA CCTGTTTACC TTGGTCCCGG CGCCGGATTT CCCGACGGCA GGTTTCATTC ATGGCCGTGC CGGCAGTATC GAAGCCTACC GCACCGGGCG GGGCCGCGTG GTCATGCGCG CGCGCTGTGA GTTCGAGACG GACAAAAAAT CCAACCGGCA GAGCATCATC GTCACCGAAC TGCCCTATCA GGTGAATAAG GCCAAGCTCA TCGAGCGCAT CGCCGAGATG GTCAAGGAAA AGCGTCTGGA AGGCATCAGT GACCTGCGCG ATGAGTCCGA CAAGTCGGGT ATGCGTATCG CCATTGAACT CAAACGGGAT GCCAATGCCG ATGTGGTGTT GAATAATCTT TACCAGCACA CGGTCATGCA GAGCGTGTTC AATATCAATA TGGTGGCGCT GCTGGACGGG GCACCGCGGA CCCTCGGTCT GCGCGATCTG CTGCAGGCCT TCATCCAGCA TCGCCGCGAG GTGGTCACCC GGCGCACCGT CTTCGAGCTG AAGAAGGCGC GCGATCGCGC CCATATCCTG GAAGGCCTGG CGGTGGCGCT GGTCAATCTG GACCCGCTCA TCAGCCTGAT CCGGGCGGCG GCCAGCCCGG CGGAAGCCAA GGCGCAGATG CTGGCGAAGT CCTGGGAGCC GGGCATGGTC GCGGCGCTGC TGGTCGAACG TGGAGAGCCC TCGGAGGGGA TGCACGCGGA CGGATATCAT CTGTCCGAAT TGCAGGCCCA GGCCATTCTC GATTTGCGTT TGCACCGTCT GACGGGGCTG GAGCAGGACA AAATCCGCGA TGAATATCTG GCCTTGCTGG ATCGTATCCG CGAGTTGCTG GAGATTCTCG GCTCGAAGAC TCGGCTCATG GAGGTCATCC GCGAAGAGCT GGTGGCTATC CGCGATCAAT ACGGGGATGC CCGGCGCAGC GAGATCGTGG CGGATACCGG TGATATTTCG ACGGAAGATC TGATTACCGA AGAGGAAATG GTGGTGACCT TCACCCACGC CGGTTATATC AAGGCGCAGC CGGTGACGGT CTTCAATGCC CAGAGACGGG GTGGCAAGGG CAAGATGGCC ACCACCACCA AAGAAGAGGA CTTTGTCGAA CGCATGTTCT GCGCTTCGAC CCATGCCTAT TGTTTGTTCT TCAGCAATCT CGGTAAAGTC TTCTGGCAAA AAGTGTATCA GTTGCCGCAG GCAGGTCGTG GCGCCAAGGG CAAGCCCATC GTCAACATGC TGTCGCTGGC GCCCACGGAG CGCATCACCG CCGTGCTGCC GGTGCGTGAC TTTACCGAGG GCCAGTTTGT CTGCATGGTT ACCTCCCTGG GCGTCGTCAA AAAGACACCG GTCATGGAGT ATTCCCGGCC GCGTAGTCAG GGGATCAATG CCATCAACCT GGATCCCGGT GATCGTCTGG TCGCCGTTGG CCTCTCTGAC GGGCAGCGCG AGTTCATGCT CTTTACCCGG CACGGCATGG CGGTGCGCTT CCCCGAGGCG AAGGTTCGGG CCATGGGTCG CAATGCCCGG GGCGTGCGCG GCATCAGTCT GGAAGAGAAT GATCGGGTGA TTTCGGCACA GTGGGTGGAC TCCAGTCAGG TGATCCTTAC CACTACGGCC AATGGGTACG GTAAATTGAC GAAAGTGGAC GAATACCGCC GCACCAACCG GGGCGGGAAG GGCGTCATTG CCATCCAGAC CAACGAGCGT AATGGCGATG TGGTCGGCGC GCTGGCGGTA ACGGAGCGGG ATGAATTGAT GCTGGTCTCC GACCACGGCA CCCTGATCCG CATCGCGGTG AACAGCATCC GCCGCACCGG CCGGAATGCG CAGGGGGTGC GTTTGATTAA TCTGGGCGAG GGTGAACAAC TCGCGGGACT GGCATTGATT GCCGATACGG ACGAAGAGGA GGGGGAGCAG ACCGATCTGC CCCAGTAA
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Protein sequence | MIEFAKETIP VSLEKEMRQS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHEMSNDWN KPYKKSARVV GDVIGKYHPH GDTAVYDTMV RMAQDFSMRY PLIDGQGNFG SVDGDSPAAM RYTEVRMSRI AHEMLADLEK ETVDFGPNYD EKEMEPLVMP ARIPNLLING SAGIAVGMAT NIPPHNLTEV ISACLALVDD PETPDEDLFT LVPAPDFPTA GFIHGRAGSI EAYRTGRGRV VMRARCEFET DKKSNRQSII VTELPYQVNK AKLIERIAEM VKEKRLEGIS DLRDESDKSG MRIAIELKRD ANADVVLNNL YQHTVMQSVF NINMVALLDG APRTLGLRDL LQAFIQHRRE VVTRRTVFEL KKARDRAHIL EGLAVALVNL DPLISLIRAA ASPAEAKAQM LAKSWEPGMV AALLVERGEP SEGMHADGYH LSELQAQAIL DLRLHRLTGL EQDKIRDEYL ALLDRIRELL EILGSKTRLM EVIREELVAI RDQYGDARRS EIVADTGDIS TEDLITEEEM VVTFTHAGYI KAQPVTVFNA QRRGGKGKMA TTTKEEDFVE RMFCASTHAY CLFFSNLGKV FWQKVYQLPQ AGRGAKGKPI VNMLSLAPTE RITAVLPVRD FTEGQFVCMV TSLGVVKKTP VMEYSRPRSQ GINAINLDPG DRLVAVGLSD GQREFMLFTR HGMAVRFPEA KVRAMGRNAR GVRGISLEEN DRVISAQWVD SSQVILTTTA NGYGKLTKVD EYRRTNRGGK GVIAIQTNER NGDVVGALAV TERDELMLVS DHGTLIRIAV NSIRRTGRNA QGVRLINLGE GEQLAGLALI ADTDEEEGEQ TDLPQ
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