Gene Lferr_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0981 
Symbol 
ID6876949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp955831 
End bp956571 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID642788862 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002219434 
Protein GI198283113 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0154476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGGA CAGAAGACGT GAATCCGACC CCTCTGGAGA AAGTGGCGCC CATGGGAAAT 
AGCAAGGAGG CGCTGCTGCT TCGCCTGCAC CACACCCCGC TTTTTTCCGC ATGGCCCAAC
GATATGATCG CGCCGCTGCT CGCCCAATCC CAGCCCCTGA CTCTGGAGTC GGGAGAGATT
CTCTTTGCCG AGGGATCGCC AGCCCGATCC TTCTATTTCC TGGCGGTAGG ACGAATTAAT
CTGATTGCGG CAGCGGCCAC GGGGCAGGAG AAAATTGTCG AAATCATCCA GCCCGATGAT
CTTTTCGCCG AGGCGGTGGC CTTTCTCGGG GGGCGCTATC CGGTGACGGC GCAGGCCGAT
GCCACGACCA CGGTACTGGA GATCCCGCTG GACCTTTTTG TCGCGACTCT GGAGCAGCGG
CCATTGTTGA TGCGCCAGAT GCTGGCGCGC CTCAGTATGC GCCTGCATTT TCTGGTCAAG
GAGCTGCGCC ATCTGAGTGT GGAGTCGGCG GAGCAGCGCT TGGCCAGCTA TCTGCTGGAG
TTGTGTCCGG TAGTCAATAG CCCCGCTGCC ATTGAGCTCC CCGCCAAGAA AGCGGCGGTC
GCGGCGCGTT TGGGCTTGAC GCCGGAAACG CTGTCGCGGG TGTTGTCCAG AATGCGTAAG
GCAGGACTCA TAGAAGTGGA ACAACGGACG ATCAGCATTC CCGACCCTCT TGCCTTACGG
CGCTGGGCCG GCGGGCGCTG A
 
Protein sequence
MPRTEDVNPT PLEKVAPMGN SKEALLLRLH HTPLFSAWPN DMIAPLLAQS QPLTLESGEI 
LFAEGSPARS FYFLAVGRIN LIAAAATGQE KIVEIIQPDD LFAEAVAFLG GRYPVTAQAD
ATTTVLEIPL DLFVATLEQR PLLMRQMLAR LSMRLHFLVK ELRHLSVESA EQRLASYLLE
LCPVVNSPAA IELPAKKAAV AARLGLTPET LSRVLSRMRK AGLIEVEQRT ISIPDPLALR
RWAGGR