Gene Lferr_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0978 
Symbol 
ID6876944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp952768 
End bp953070 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content60% 
IMG OID642788857 
Productprotein of unknown function DUF971 
Protein accessionYP_002219431 
Protein GI198283110 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.039823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC CCCGTACCCA GCCCCTGGAG ATTCGCCCCC TCATGATCAG CCGCGTCATG 
GAAGTCGACT GGGCCGACGG ACATACCAGC CGCCTGACCT TTGAACACCT GCGGGTAGAA
TGCCCCTGCG CGGAGTGCAA AGGACACACG CCCGATCAGG CGCAGATCGT CACCGGCAAG
GAGCATGTGA GCGTTGTGGA GGTGGTGCCG GTAGGCCATT ACGCGGTGCA GTTGCATTTC
AGTGATGGCC ACAATACCGG GATTTTCACG TGGGAGTATC TGCGCAGGCT GGACGCTGAA
TGA
 
Protein sequence
MSDPRTQPLE IRPLMISRVM EVDWADGHTS RLTFEHLRVE CPCAECKGHT PDQAQIVTGK 
EHVSVVEVVP VGHYAVQLHF SDGHNTGIFT WEYLRRLDAE