Gene Lferr_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0973 
SymbolpyrG 
ID6876939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp947886 
End bp949523 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content59% 
IMG OID642788852 
ProductCTP synthetase 
Protein accessionYP_002219426 
Protein GI198283105 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0924832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT ACATTTTCGT AACAGGTGGG GTGGTTTCTT CTCTGGGCAA GGGCGCCGCT 
GGTGCAGCGC TTGGCGCACT GCTGGAGGCG CGTGGGCTGA AGGTCACCAT GCTCAAGCTA
GACCCTTATA TCAACGTCGA TCCAGGCACC ATGAGCCCCT TTCAGCACGG TGAGGTTTTC
GTCACCGCCG ATGGCGCGGA AACGGATCTG GATTTGGGGC ATTACGAACG ATTCCTCTCG
ACGCGGATGG GTAAGCGCAA CAATTTCACC ACCGGCCTGG TTTATCAGAC CGTCATTGAA
AAAGAACGGC GCGGCGACTA TCTGGGACGT ACGGTGCAGG TCATCCCCCA TGTCACCGAT
GAGATCAAGC GGCGCATCCG GTTGGGTGCG GCGGACGCGG ATGTGGCGCT GGTGGAGATC
GGTGGTACCG TCGGCGACAT CGAATCGCAG CCCTTTCTGG AAGCGATCCG CCAGATGGCG
GTAGAGGAGG AACGGGGTGA CACCCTCTTC ATGCATCTGA CACTGGTACC CTATCTGGCG
TCTGCCGGGG AAATGAAAAC CAAACCGACC CAGCACTCGG TGCGTGAACT GCGTGCCATC
GGTATCCAGC CGGATGTGTT GCTTTGTCGT GCTGACCGGC CCATACCTGC CGACCACCGG
GCCAAAATCG GGCTTTTTTC CAATCTGCCG GAAAAGGCGG TCATTTCGGC GATCGACACC
GACAGCATCT ATCGTATTCC GTTGCTGTTC CATGCCCAGG GTCTGGATGA TCTGGTGGTG
CAGAATCTCG GGCTACATCT GTCAGCCCCG GACCTTTCGG TATGGAATGG CATCATAAAC
GCCCTGGAAC ACCCGGAAGG TGAGGTGGTG ATTGCCCTCG TGGGTAAATA TGTGGGGCTT
ACCGAGTCCT ACAAGTCACT GGCCGAGGCC TTGCTTCACG CCGGGTTGCG GGCGCGACGG
AGTGTGCGCT TCCTGTATGT GGATGCGGAA GATGTCGAAA CGCAGGGGAC GGAGATACTC
GCAGAAGCGG ATGCCATTCT GGTACCGGGT GGTTTCGGCG GGCGGGGCAC AGAGGGTAAA
ATTGCCAGCA TCCGCCACGC ACGGGAGCGG AAGGTGCCTT ATCTCGGCAT TTGCCTCGGC
ATGCAGCTCG CGGTTGTCGA GTTTGCGCGG CATCGCGCTG GTCTCATGAA CGCCAACAGT
ACCGAACTGG ACCCTCAGAC TCCGGCCCCG GTCATTACGC TGATGACCGA GTGGTCCGAC
CCGGAAGGCC ACAAGGCGTA CCGGGAGGAA GGGGGAAATC TCGGCGGTAC GATGCGGCTG
GGGGAGCAGG AATGTCGCCT TGAACCCGAC AGTCTGGCAA TACAAGCTTA CGGGCAGGAG
CGGATTCACG AGCGCCATCG CCATCGCTTC GAGTTCAACA ACCGTTACCG TGAACCATTG
GCTATGGCAG GGTTGCGTTA CACGGGGTTC TCCGCGGACA GTGAACTGGT GGAAGTGGTG
GAGTTGCCTG ACCATCCCTG GTTTCTGGGC TGCCAGTTTC ACCCGGAGTT CACCAGTAAT
CCGCGTGAGG GGCATCCATT ATTTGACGCC TTTATGCGCG CCGCCATCGC CCAGCGGGAA
CGGGACGGTT CGTCATGA
 
Protein sequence
MSKYIFVTGG VVSSLGKGAA GAALGALLEA RGLKVTMLKL DPYINVDPGT MSPFQHGEVF 
VTADGAETDL DLGHYERFLS TRMGKRNNFT TGLVYQTVIE KERRGDYLGR TVQVIPHVTD
EIKRRIRLGA ADADVALVEI GGTVGDIESQ PFLEAIRQMA VEEERGDTLF MHLTLVPYLA
SAGEMKTKPT QHSVRELRAI GIQPDVLLCR ADRPIPADHR AKIGLFSNLP EKAVISAIDT
DSIYRIPLLF HAQGLDDLVV QNLGLHLSAP DLSVWNGIIN ALEHPEGEVV IALVGKYVGL
TESYKSLAEA LLHAGLRARR SVRFLYVDAE DVETQGTEIL AEADAILVPG GFGGRGTEGK
IASIRHARER KVPYLGICLG MQLAVVEFAR HRAGLMNANS TELDPQTPAP VITLMTEWSD
PEGHKAYREE GGNLGGTMRL GEQECRLEPD SLAIQAYGQE RIHERHRHRF EFNNRYREPL
AMAGLRYTGF SADSELVEVV ELPDHPWFLG CQFHPEFTSN PREGHPLFDA FMRAAIAQRE
RDGSS