| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0971 |
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| Symbol | |
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| ID | 6876937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 944490 |
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| End bp | 946517 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642788850 |
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| Product | excinuclease ABC, B subunit |
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| Protein accession | YP_002219424 |
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| Protein GI | 198283103 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.91414 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.150476 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGC GCTTTATCCT GGAGAGCAGT TTCCCGCCGC AGGGCGACCA GCCGGAGGCT
ATCCGTCTGT TGGTGAACGG CCTCGCCGCT GGTGAATATT TCCAGACCCT GTTGGGGGTG
ACCGGTTCGG GCAAGACCTT CACCATGGCC AACGTCATCG CCATCACTCA CCGGCCCGCC
ATCATCATGG CGCCCAACAA GACCCTGGCA GCGCAGCTCT ATGCGGAAAT GCGCGCGTTC
TTTCCTCACA ATGCCGTGGA GTATTTCGTC AGTTATTACG ATTACTACCA GCCGGAGGCC
TACGTTCCTT CCTCCGACAC CTTCATTGAA AAGGACGCCG CTATCAATGA TCACATCGAG
CAGATGCGCC TCTCCGCCAC CAAGGCCTTG CTGGAACGGC CGGATGTCAT CATTGTGGCC
ACCGTTTCGG CGATCTACGG CCTGGGTGAT CCCGCCTCCT ACCATGGCAT GATTCTGCAT
CTGCGCGAAT CCTCCACCAT GGATCAGCGC GCCATCCTCA AGCGTCTGGC GGAGATGCAA
TACAGCCGTA ATCCTTTGGA AATGAAGCGG GGTACCTTTC GCGTCAACGG CGATGTCATC
GATATATGGC CCGCGGAAAG TGAGGACGAA GCCGTTCGGA TCGAGCTTTT TGGCGACGAA
CTGGAGCGCA TCTCGCTCTT CGATCCCCTG ACCGGCAAGA CCATCACCCG TTTGCCGCGC
TACACCATCT ACCCCAAAAG CCACTACGTC ACCCCGCGCG AGACCATTCT CGCGGCGCTG
GACGCTATCA AAGATGAGCT TCGCGCGCGT CTGGAGGACC TGCGCCGCGC CAACAAGCTG
GTCGAGGCGC AACGACTGGA GCAGCGCACC CGCTTTGATC TGGAGATGAT GGCCGAGCTG
GGGTATTGCT CGGGGATCGA GAATTACTCC CGCTACCTCT CGGGACGAGT GCCCGGTCAG
GCACCGCCGA CCCTGATGGA CTACCTCCCC AAGGATGCCC TGCTATTCAT GGACGAATCC
CATGTCACGG TCCCACAGTT CGGGGGGATG TACAAGGGCG ACCGTTCGCG CAAGGAAACG
CTGGTGGAAT ACGGGTTCCG GTTACCCTCG GCGCTGGACA ACCGGCCCTT GACGTTTCCC
GAGTTCGAGT CGCTGATGCC GCAGACCGTG TTTATTTCCG CCACGCCCGG TCCCTACGAA
CTGGAGCACT CCGGGCAGGT GGTGGAGCAG GTGGTGCGGC CCACCGGCCT GGTCGATCCC
GCTGTGGATA TTCGTCCGGC GAAAGGGCAG GTCGATGATC TGATCAGTGA AATCAACATC
GTTGTACGTA ACGGTTGGCG CATTCTGGTG ACGACGCTGA CCAAGCGGAT GGCCGAAGAT
CTGACCGATT ATCTGCATGA GCTAGGCATT AAATGCCGTT ATCTGCACTC TGATATCGAA
ACGGTGGAGC GGGTGGAGAT CATTCGCGAT CTGCGCGCCG GGGTGTTCGA CGTGCTGATC
GGGATTAACC TGTTGCGGGA AGGCCTGGAT ATGCCGGAGG TGGCATTGGT CGCCATTCTG
GATGCGGATA AGGAGGGCTT CCTGCGCTCG GAGCGGTCCC TGATTCAGAC CATCGGGCGC
GCCGCGCGTA ATTTGCATGG ACGGGCCATT CTCTATGCGG ACAGCATCAC CAAATCCATG
GCTCGGGCCA TAGCCGAAAC CGACCGCCGC CGGGAAAAGC AGTTGCAGTT CAATGCAGCG
CACGGCATCA CCCCGCGCGG CATCGTCAAG CCGGTATCGG ACATGATTGA GGGGGTCTAT
CGCCGCAATG TACAACCTGC CGCGCATGCC GCGGAAAAAA ATGCGGATTA TCGTGTGCTC
CGTGATCCCC AAGCCGTTGC CAAGAAAATC AAGGAACTGG AGGAAGCGAT GTACCGACAC
GCCCGCAACC TGGAGTTTGA GCAGGCAGCG GCGCTGCGGG ACGACATCAA AAAACTGGAA
ACCCGCCTTC TGGGAACCGA CCTGCCGGTA TCTCTGGAGG AGGACTGA
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| Protein sequence | MDKRFILESS FPPQGDQPEA IRLLVNGLAA GEYFQTLLGV TGSGKTFTMA NVIAITHRPA
IIMAPNKTLA AQLYAEMRAF FPHNAVEYFV SYYDYYQPEA YVPSSDTFIE KDAAINDHIE
QMRLSATKAL LERPDVIIVA TVSAIYGLGD PASYHGMILH LRESSTMDQR AILKRLAEMQ
YSRNPLEMKR GTFRVNGDVI DIWPAESEDE AVRIELFGDE LERISLFDPL TGKTITRLPR
YTIYPKSHYV TPRETILAAL DAIKDELRAR LEDLRRANKL VEAQRLEQRT RFDLEMMAEL
GYCSGIENYS RYLSGRVPGQ APPTLMDYLP KDALLFMDES HVTVPQFGGM YKGDRSRKET
LVEYGFRLPS ALDNRPLTFP EFESLMPQTV FISATPGPYE LEHSGQVVEQ VVRPTGLVDP
AVDIRPAKGQ VDDLISEINI VVRNGWRILV TTLTKRMAED LTDYLHELGI KCRYLHSDIE
TVERVEIIRD LRAGVFDVLI GINLLREGLD MPEVALVAIL DADKEGFLRS ERSLIQTIGR
AARNLHGRAI LYADSITKSM ARAIAETDRR REKQLQFNAA HGITPRGIVK PVSDMIEGVY
RRNVQPAAHA AEKNADYRVL RDPQAVAKKI KELEEAMYRH ARNLEFEQAA ALRDDIKKLE
TRLLGTDLPV SLEED
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