Gene Lferr_0935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_0935 
Symbol 
ID6876900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp897828 
End bp899174 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content55% 
IMG OID642788815 
Productsodium/hydrogen exchanger 
Protein accessionYP_002219390 
Protein GI198283069 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC TTAGTCATGT TTTTGATCTG CCCGCGCAGA AATCCGAACT GCTGATCTTT 
TTCACATTGC TGTCACTCAG CGTCATCATA TTCGCCGCGC GCATGGGTGG AGAAATCGCC
GCCAGGATCG GCCAGGCGGC GGTGGTTGGC GAAATCGTCG CCGGAATCGT GCTGGGTCCG
TCGCTGTTCG GCCTGCTGAT GCCCGATGCC TTCCACTACA TTTTTCATTC GATTCCTGCT
GGCCCCCTGG ATGCCCTTTC TCAACTGGGT CTGATCCTGT TGATGTTTCA GATCGGTCTG
GAATTCGATT TTTCCCACCT GAAAGAAAAA GCAAACCGGA ATGCGGTGTT ATGGGTGGCA
ACGGCAAGTA TGCTGATACC ATTCGTCCTT GGTCTGGGGT TCGGCCTGGT CAGCGCGCCC
GTTCTCGCTC CCCAAGCCGA ACCGTGGACA TCGGCACTGT TTATCGCCAC CGCATTTTCT
ATCACCGCCG TACCCATCCT TGGCCGCATC ATGATGGAGT TCGGCATGAC CAGATCCCGC
CTCGGAGTCA TTGCCATCAG TGCGGCGGCA ATCAACGACG TCGTCGGCTG GTTGTTGCTC
GCGCTGGTGA CGACTCTGGC GCTGTCCCAT TTTGAAGCGC TCACCTTCGC CATCAAGGTT
TTTTTGGTAT TCGCTTTCAT CGTCATCTGG ATATCTGGCA TTCGGCCGCT GATGAAATGG
GTGATCCGGC GCTTCAGCGC GGGAGGCAAG CTGACTCCGC ATTTGTTGGG CATCATCCTG
ATCAGCATAT TCGTTTCCGG ATTGATCACC TCTTCGTTGG GGATTTTCAC GATCTTTGGC
GGCTTCATCA TGGGCGTCAT CCTCCACGAC GCGGATGAAT TCGTGGAGGC GTGGAATGAG
CGGGTCTCCC CTTTTGTGCT GGTCTTCTTT CTCCCGATTT TCTTCACTTA TACGGGCCTG
CGTACCAATA TTGGCGGATT GGACAGCGCG TCACTCTGGG GTTGGTGCGG ATCGATCTTA
CTTCTTGCGA CGGTGGGCAA GTTCGGCGGT GCATATGGGG CGGCACGGAT CGCCGGTTTG
AACCACCACC AGGCCAAGGT TATGGGCATC ATGATGAATA CCCGCGCATT AATGGAGTTG
ATCGTCATCA ATGTAGGATA TGATCTGGGT GCCATATCCC AGCAGGTTTT CACCATGCTG
GTGATCATGG CCATCTTCAG CACCATCATC ACGACACCTT TTCTCCGTGC GTGGTTACCC
CGGGCCGGGG TACAACTGAC CTCCCCCGTT CCCATACCCG AGCGGTCGCA AAACCGTTTG
ACCACAGATT ACCGCCCAGA CCAGTAA
 
Protein sequence
MSTLSHVFDL PAQKSELLIF FTLLSLSVII FAARMGGEIA ARIGQAAVVG EIVAGIVLGP 
SLFGLLMPDA FHYIFHSIPA GPLDALSQLG LILLMFQIGL EFDFSHLKEK ANRNAVLWVA
TASMLIPFVL GLGFGLVSAP VLAPQAEPWT SALFIATAFS ITAVPILGRI MMEFGMTRSR
LGVIAISAAA INDVVGWLLL ALVTTLALSH FEALTFAIKV FLVFAFIVIW ISGIRPLMKW
VIRRFSAGGK LTPHLLGIIL ISIFVSGLIT SSLGIFTIFG GFIMGVILHD ADEFVEAWNE
RVSPFVLVFF LPIFFTYTGL RTNIGGLDSA SLWGWCGSIL LLATVGKFGG AYGAARIAGL
NHHQAKVMGI MMNTRALMEL IVINVGYDLG AISQQVFTML VIMAIFSTII TTPFLRAWLP
RAGVQLTSPV PIPERSQNRL TTDYRPDQ